Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Pde6dO55057 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Pde6dO55057 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pde6dO55057 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Pde6dO55057 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Pde6dO55057 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pde6dO55057 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.1■□□□□ 0.65
Pde6dO55057 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pde6dO55057 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
Pde6dO55057 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pde6dO55057 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Pde6dO55057 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pde6dO55057 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.07■□□□□ 0.64
Pde6dO55057 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Pde6dO55057 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pde6dO55057 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pde6dO55057 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pde6dO55057 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Pde6dO55057 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pde6dO55057 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pde6dO55057 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pde6dO55057 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.03■□□□□ 0.64
Pde6dO55057 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pde6dO55057 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pde6dO55057 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.01■□□□□ 0.63
Pde6dO55057 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pde6dO55057 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pde6dO55057 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pde6dO55057 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pde6dO55057 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pde6dO55057 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pde6dO55057 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pde6dO55057 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Pde6dO55057 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pde6dO55057 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pde6dO55057 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pde6dO55057 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pde6dO55057 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pde6dO55057 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pde6dO55057 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC18.95■□□□□ 0.62
Pde6dO55057 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pde6dO55057 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.95■□□□□ 0.62
Pde6dO55057 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pde6dO55057 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pde6dO55057 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
Pde6dO55057 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pde6dO55057 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pde6dO55057 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pde6dO55057 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pde6dO55057 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pde6dO55057 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pde6dO55057 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pde6dO55057 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pde6dO55057 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pde6dO55057 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pde6dO55057 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
Pde6dO55057 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pde6dO55057 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Pde6dO55057 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pde6dO55057 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Pde6dO55057 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pde6dO55057 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pde6dO55057 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pde6dO55057 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pde6dO55057 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pde6dO55057 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pde6dO55057 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pde6dO55057 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pde6dO55057 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pde6dO55057 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Pde6dO55057 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pde6dO55057 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Pde6dO55057 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Pde6dO55057 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pde6dO55057 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.86■□□□□ 0.61
Pde6dO55057 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pde6dO55057 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.86■□□□□ 0.61
Pde6dO55057 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pde6dO55057 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Pde6dO55057 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pde6dO55057 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pde6dO55057 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Pde6dO55057 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pde6dO55057 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pde6dO55057 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6dO55057 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6dO55057 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6dO55057 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
Pde6dO55057 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pde6dO55057 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Pde6dO55057 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pde6dO55057 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pde6dO55057 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pde6dO55057 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pde6dO55057 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pde6dO55057 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.81■□□□□ 0.6
Pde6dO55057 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pde6dO55057 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Pde6dO55057 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6dO55057 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms