Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SncaO55042 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SncaO55042 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SncaO55042 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SncaO55042 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SncaO55042 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SncaO55042 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SncaO55042 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SncaO55042 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SncaO55042 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SncaO55042 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SncaO55042 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SncaO55042 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SncaO55042 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SncaO55042 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SncaO55042 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SncaO55042 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SncaO55042 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SncaO55042 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SncaO55042 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SncaO55042 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SncaO55042 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
SncaO55042 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SncaO55042 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SncaO55042 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SncaO55042 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.85■□□□□ 0.77
SncaO55042 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SncaO55042 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SncaO55042 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
SncaO55042 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SncaO55042 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SncaO55042 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SncaO55042 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SncaO55042 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SncaO55042 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SncaO55042 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SncaO55042 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SncaO55042 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SncaO55042 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SncaO55042 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SncaO55042 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SncaO55042 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SncaO55042 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SncaO55042 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SncaO55042 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
SncaO55042 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SncaO55042 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.78■□□□□ 0.76
SncaO55042 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.78■□□□□ 0.76
SncaO55042 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SncaO55042 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SncaO55042 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
SncaO55042 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SncaO55042 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SncaO55042 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SncaO55042 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SncaO55042 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SncaO55042 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SncaO55042 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SncaO55042 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SncaO55042 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SncaO55042 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SncaO55042 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SncaO55042 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SncaO55042 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SncaO55042 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SncaO55042 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SncaO55042 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SncaO55042 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SncaO55042 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SncaO55042 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SncaO55042 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SncaO55042 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SncaO55042 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SncaO55042 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SncaO55042 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SncaO55042 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SncaO55042 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SncaO55042 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SncaO55042 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SncaO55042 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.68■□□□□ 0.74
SncaO55042 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
SncaO55042 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SncaO55042 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SncaO55042 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SncaO55042 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SncaO55042 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SncaO55042 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.65■□□□□ 0.74
SncaO55042 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SncaO55042 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SncaO55042 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SncaO55042 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SncaO55042 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
SncaO55042 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SncaO55042 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SncaO55042 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SncaO55042 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.64■□□□□ 0.73
SncaO55042 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SncaO55042 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SncaO55042 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SncaO55042 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms