Protein–RNA interactions for Protein: O35445

Rnf5, E3 ubiquitin-protein ligase RNF5, mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf5O35445 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.39■□□□□ 0.69
Rnf5O35445 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf5O35445 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf5O35445 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Rnf5O35445 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf5O35445 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.36■□□□□ 0.69
Rnf5O35445 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf5O35445 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf5O35445 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf5O35445 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.35■□□□□ 0.69
Rnf5O35445 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.35■□□□□ 0.69
Rnf5O35445 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf5O35445 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf5O35445 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf5O35445 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf5O35445 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf5O35445 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf5O35445 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf5O35445 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.33■□□□□ 0.69
Rnf5O35445 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf5O35445 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
Rnf5O35445 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf5O35445 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf5O35445 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Rnf5O35445 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf5O35445 Gm9397-201ENSMUST00000200125 605 ntBASIC19.31■□□□□ 0.68
Rnf5O35445 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf5O35445 Gm24970-201ENSMUST00000175582 82 ntBASIC19.3■□□□□ 0.68
Rnf5O35445 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.3■□□□□ 0.68
Rnf5O35445 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf5O35445 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.3■□□□□ 0.68
Rnf5O35445 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf5O35445 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Rnf5O35445 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Rnf5O35445 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.29■□□□□ 0.68
Rnf5O35445 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf5O35445 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf5O35445 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf5O35445 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf5O35445 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.28■□□□□ 0.68
Rnf5O35445 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf5O35445 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Rnf5O35445 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rnf5O35445 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.26■□□□□ 0.67
Rnf5O35445 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf5O35445 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.26■□□□□ 0.67
Rnf5O35445 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf5O35445 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Rnf5O35445 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf5O35445 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.25■□□□□ 0.67
Rnf5O35445 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.25■□□□□ 0.67
Rnf5O35445 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf5O35445 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf5O35445 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.23■□□□□ 0.67
Rnf5O35445 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf5O35445 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf5O35445 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf5O35445 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.22■□□□□ 0.67
Rnf5O35445 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf5O35445 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.21■□□□□ 0.67
Rnf5O35445 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf5O35445 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf5O35445 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf5O35445 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rnf5O35445 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf5O35445 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf5O35445 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.17■□□□□ 0.66
Rnf5O35445 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf5O35445 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf5O35445 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf5O35445 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.16■□□□□ 0.66
Rnf5O35445 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.16■□□□□ 0.66
Rnf5O35445 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf5O35445 Gm45855-201ENSMUST00000212546 880 ntBASIC19.16■□□□□ 0.66
Rnf5O35445 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf5O35445 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf5O35445 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf5O35445 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf5O35445 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.14■□□□□ 0.65
Rnf5O35445 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf5O35445 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.13■□□□□ 0.65
Rnf5O35445 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf5O35445 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf5O35445 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf5O35445 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Rnf5O35445 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Rnf5O35445 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf5O35445 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Rnf5O35445 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Rnf5O35445 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf5O35445 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf5O35445 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Rnf5O35445 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rnf5O35445 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf5O35445 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf5O35445 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
Rnf5O35445 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf5O35445 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf5O35445 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf5O35445 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms