Protein–RNA interactions for Protein: O08738

Casp6, Caspase-6, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp6O08738 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Casp6O08738 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Casp6O08738 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.1■□□□□ 0.97
Casp6O08738 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Casp6O08738 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Casp6O08738 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Casp6O08738 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
Casp6O08738 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.07■□□□□ 0.96
Casp6O08738 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Casp6O08738 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Casp6O08738 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Casp6O08738 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Casp6O08738 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Casp6O08738 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Casp6O08738 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Casp6O08738 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Casp6O08738 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Casp6O08738 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Casp6O08738 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21■□□□□ 0.95
Casp6O08738 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21■□□□□ 0.95
Casp6O08738 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21■□□□□ 0.95
Casp6O08738 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.99■□□□□ 0.95
Casp6O08738 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Casp6O08738 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.99■□□□□ 0.95
Casp6O08738 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.99■□□□□ 0.95
Casp6O08738 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.99■□□□□ 0.95
Casp6O08738 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Casp6O08738 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Casp6O08738 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Casp6O08738 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Casp6O08738 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Casp6O08738 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Casp6O08738 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Casp6O08738 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.96■□□□□ 0.95
Casp6O08738 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Casp6O08738 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Casp6O08738 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Casp6O08738 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.95■□□□□ 0.94
Casp6O08738 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Casp6O08738 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Casp6O08738 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.91■□□□□ 0.94
Casp6O08738 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Casp6O08738 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Casp6O08738 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.91■□□□□ 0.94
Casp6O08738 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.91■□□□□ 0.94
Casp6O08738 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Casp6O08738 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Casp6O08738 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
Casp6O08738 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.89■□□□□ 0.94
Casp6O08738 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Casp6O08738 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Casp6O08738 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.89■□□□□ 0.93
Casp6O08738 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Casp6O08738 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Casp6O08738 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Casp6O08738 Mir6538-201ENSMUST00000183713 110 ntBASIC20.87■□□□□ 0.93
Casp6O08738 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.87■□□□□ 0.93
Casp6O08738 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Casp6O08738 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Casp6O08738 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Casp6O08738 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.84■□□□□ 0.93
Casp6O08738 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Casp6O08738 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Casp6O08738 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.83■□□□□ 0.92
Casp6O08738 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Casp6O08738 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Casp6O08738 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Casp6O08738 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Casp6O08738 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.8■□□□□ 0.92
Casp6O08738 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Casp6O08738 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Casp6O08738 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Casp6O08738 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Casp6O08738 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.79■□□□□ 0.92
Casp6O08738 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Casp6O08738 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Casp6O08738 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Casp6O08738 Gm6311-201ENSMUST00000073790 878 ntBASIC20.77■□□□□ 0.92
Casp6O08738 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Casp6O08738 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.77■□□□□ 0.91
Casp6O08738 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.76■□□□□ 0.91
Casp6O08738 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Casp6O08738 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Casp6O08738 Particl-201ENSMUST00000205370 1560 ntBASIC20.75■□□□□ 0.91
Casp6O08738 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Casp6O08738 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.74■□□□□ 0.91
Casp6O08738 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Casp6O08738 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Casp6O08738 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.72■□□□□ 0.91
Casp6O08738 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Casp6O08738 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Casp6O08738 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Casp6O08738 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Casp6O08738 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Casp6O08738 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Casp6O08738 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Casp6O08738 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Casp6O08738 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Casp6O08738 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Casp6O08738 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms