Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cpsf4lE9Q2N0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cpsf4lE9Q2N0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cpsf4lE9Q2N0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cpsf4lE9Q2N0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cpsf4lE9Q2N0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cpsf4lE9Q2N0 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cpsf4lE9Q2N0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cpsf4lE9Q2N0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.78■□□□□ 0.92
Cpsf4lE9Q2N0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf4lE9Q2N0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Cpsf4lE9Q2N0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cpsf4lE9Q2N0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf4lE9Q2N0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf4lE9Q2N0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.75■□□□□ 0.91
Cpsf4lE9Q2N0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Cpsf4lE9Q2N0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Cpsf4lE9Q2N0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.74■□□□□ 0.91
Cpsf4lE9Q2N0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf4lE9Q2N0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf4lE9Q2N0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Cpsf4lE9Q2N0 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Cpsf4lE9Q2N0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.73■□□□□ 0.91
Cpsf4lE9Q2N0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf4lE9Q2N0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf4lE9Q2N0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Cpsf4lE9Q2N0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf4lE9Q2N0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf4lE9Q2N0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf4lE9Q2N0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf4lE9Q2N0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf4lE9Q2N0 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf4lE9Q2N0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.68■□□□□ 0.9
Cpsf4lE9Q2N0 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf4lE9Q2N0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf4lE9Q2N0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf4lE9Q2N0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Cpsf4lE9Q2N0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpsf4lE9Q2N0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.65■□□□□ 0.9
Cpsf4lE9Q2N0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.64■□□□□ 0.89
Cpsf4lE9Q2N0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cpsf4lE9Q2N0 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.64■□□□□ 0.89
Cpsf4lE9Q2N0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf4lE9Q2N0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf4lE9Q2N0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf4lE9Q2N0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Cpsf4lE9Q2N0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cpsf4lE9Q2N0 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.62■□□□□ 0.89
Cpsf4lE9Q2N0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cpsf4lE9Q2N0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Cpsf4lE9Q2N0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cpsf4lE9Q2N0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.6■□□□□ 0.89
Cpsf4lE9Q2N0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cpsf4lE9Q2N0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cpsf4lE9Q2N0 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cpsf4lE9Q2N0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cpsf4lE9Q2N0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cpsf4lE9Q2N0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.58■□□□□ 0.89
Cpsf4lE9Q2N0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cpsf4lE9Q2N0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpsf4lE9Q2N0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cpsf4lE9Q2N0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpsf4lE9Q2N0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpsf4lE9Q2N0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpsf4lE9Q2N0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Cpsf4lE9Q2N0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpsf4lE9Q2N0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.54■□□□□ 0.88
Cpsf4lE9Q2N0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cpsf4lE9Q2N0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Cpsf4lE9Q2N0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf4lE9Q2N0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
Cpsf4lE9Q2N0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf4lE9Q2N0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpsf4lE9Q2N0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpsf4lE9Q2N0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cpsf4lE9Q2N0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cpsf4lE9Q2N0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.5■□□□□ 0.87
Cpsf4lE9Q2N0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cpsf4lE9Q2N0 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.49■□□□□ 0.87
Cpsf4lE9Q2N0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cpsf4lE9Q2N0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.49■□□□□ 0.87
Cpsf4lE9Q2N0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cpsf4lE9Q2N0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cpsf4lE9Q2N0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cpsf4lE9Q2N0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cpsf4lE9Q2N0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.45■□□□□ 0.87
Cpsf4lE9Q2N0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpsf4lE9Q2N0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cpsf4lE9Q2N0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpsf4lE9Q2N0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cpsf4lE9Q2N0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cpsf4lE9Q2N0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf4lE9Q2N0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Cpsf4lE9Q2N0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cpsf4lE9Q2N0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf4lE9Q2N0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf4lE9Q2N0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf4lE9Q2N0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Cpsf4lE9Q2N0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cpsf4lE9Q2N0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 211.2 ms