Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
A0A1W2PRF3 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
A0A1W2PRF3 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
A0A1W2PRF3 AC108673.1-201ENST00000510422 1159 ntBASIC21.52■■□□□ 1.04
A0A1W2PRF3 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC21.52■■□□□ 1.04
A0A1W2PRF3 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
A0A1W2PRF3 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
A0A1W2PRF3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
A0A1W2PRF3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
A0A1W2PRF3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
A0A1W2PRF3 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
A0A1W2PRF3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.5■■□□□ 1.03
A0A1W2PRF3 ABHD17AP4-201ENST00000411545 909 ntBASIC21.49■■□□□ 1.03
A0A1W2PRF3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.49■■□□□ 1.03
A0A1W2PRF3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.49■■□□□ 1.03
A0A1W2PRF3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.49■■□□□ 1.03
A0A1W2PRF3 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
A0A1W2PRF3 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
A0A1W2PRF3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
A0A1W2PRF3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.48■■□□□ 1.03
A0A1W2PRF3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.48■■□□□ 1.03
A0A1W2PRF3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
A0A1W2PRF3 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.48■■□□□ 1.03
A0A1W2PRF3 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
A0A1W2PRF3 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
A0A1W2PRF3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.47■■□□□ 1.03
A0A1W2PRF3 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
A0A1W2PRF3 DUX4L29-201ENST00000425409 679 ntBASIC21.46■■□□□ 1.03
A0A1W2PRF3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
A0A1W2PRF3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
A0A1W2PRF3 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
A0A1W2PRF3 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
A0A1W2PRF3 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
A0A1W2PRF3 ST7-205ENST00000393446 2114 ntTSL 5 BASIC21.44■■□□□ 1.02
A0A1W2PRF3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC21.44■■□□□ 1.02
A0A1W2PRF3 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
A0A1W2PRF3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.43■■□□□ 1.02
A0A1W2PRF3 AC021231.2-201ENST00000594613 730 ntBASIC21.43■■□□□ 1.02
A0A1W2PRF3 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
A0A1W2PRF3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
A0A1W2PRF3 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
A0A1W2PRF3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
A0A1W2PRF3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.42■■□□□ 1.02
A0A1W2PRF3 AC010864.1-201ENST00000609407 1511 ntBASIC21.42■■□□□ 1.02
A0A1W2PRF3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.42■■□□□ 1.02
A0A1W2PRF3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.42■■□□□ 1.02
A0A1W2PRF3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
A0A1W2PRF3 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.41■■□□□ 1.02
A0A1W2PRF3 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
A0A1W2PRF3 MIR7108-201ENST00000614319 87 ntBASIC21.4■■□□□ 1.02
A0A1W2PRF3 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
A0A1W2PRF3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
A0A1W2PRF3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.39■■□□□ 1.01
A0A1W2PRF3 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
A0A1W2PRF3 ZNRF2P2-203ENST00000454624 420 ntBASIC21.38■■□□□ 1.01
A0A1W2PRF3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
A0A1W2PRF3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
A0A1W2PRF3 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
A0A1W2PRF3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.37■■□□□ 1.01
A0A1W2PRF3 AL135925.1-201ENST00000605920 1701 ntBASIC21.37■■□□□ 1.01
A0A1W2PRF3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
A0A1W2PRF3 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
A0A1W2PRF3 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
A0A1W2PRF3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
A0A1W2PRF3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
A0A1W2PRF3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.35■■□□□ 1.01
A0A1W2PRF3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
A0A1W2PRF3 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
A0A1W2PRF3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
A0A1W2PRF3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
A0A1W2PRF3 ST7-202ENST00000323984 2142 ntTSL 5 BASIC21.34■■□□□ 1.01
A0A1W2PRF3 ST7-207ENST00000393449 2127 ntTSL 5 BASIC21.34■■□□□ 1.01
A0A1W2PRF3 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
A0A1W2PRF3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
A0A1W2PRF3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
A0A1W2PRF3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.33■■□□□ 1.01
A0A1W2PRF3 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
A0A1W2PRF3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
A0A1W2PRF3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.32■■□□□ 1
A0A1W2PRF3 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC21.32■■□□□ 1
A0A1W2PRF3 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC21.31■■□□□ 1
A0A1W2PRF3 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
A0A1W2PRF3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.31■■□□□ 1
A0A1W2PRF3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
A0A1W2PRF3 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.3■■□□□ 1
A0A1W2PRF3 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.3■■□□□ 1
A0A1W2PRF3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
A0A1W2PRF3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
A0A1W2PRF3 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
A0A1W2PRF3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.29■■□□□ 1
A0A1W2PRF3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
A0A1W2PRF3 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
A0A1W2PRF3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
A0A1W2PRF3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
A0A1W2PRF3 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.26■□□□□ 0.99
A0A1W2PRF3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
A0A1W2PRF3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.26■□□□□ 0.99
A0A1W2PRF3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
A0A1W2PRF3 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
A0A1W2PRF3 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms