Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 DYNLL1-208ENST00000550178 581 ntBASIC21.44■■□□□ 1.02
DUXBA0A1W2PPF3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
DUXBA0A1W2PPF3 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
DUXBA0A1W2PPF3 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DUXBA0A1W2PPF3 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
DUXBA0A1W2PPF3 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DUXBA0A1W2PPF3 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DUXBA0A1W2PPF3 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DUXBA0A1W2PPF3 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
DUXBA0A1W2PPF3 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
DUXBA0A1W2PPF3 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DUXBA0A1W2PPF3 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.4■■□□□ 1.02
DUXBA0A1W2PPF3 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
DUXBA0A1W2PPF3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.4■■□□□ 1.02
DUXBA0A1W2PPF3 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
DUXBA0A1W2PPF3 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DUXBA0A1W2PPF3 AL121749.1-202ENST00000609313 2153 ntBASIC21.39■■□□□ 1.01
DUXBA0A1W2PPF3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
DUXBA0A1W2PPF3 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
DUXBA0A1W2PPF3 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
DUXBA0A1W2PPF3 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
DUXBA0A1W2PPF3 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
DUXBA0A1W2PPF3 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DUXBA0A1W2PPF3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DUXBA0A1W2PPF3 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
DUXBA0A1W2PPF3 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DUXBA0A1W2PPF3 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DUXBA0A1W2PPF3 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.35■■□□□ 1.01
DUXBA0A1W2PPF3 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.34■■□□□ 1.01
DUXBA0A1W2PPF3 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.34■■□□□ 1.01
DUXBA0A1W2PPF3 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DUXBA0A1W2PPF3 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
DUXBA0A1W2PPF3 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC21.33■■□□□ 1.01
DUXBA0A1W2PPF3 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.32■■□□□ 1
DUXBA0A1W2PPF3 AL031258.1-201ENST00000623562 325 ntBASIC21.32■■□□□ 1
DUXBA0A1W2PPF3 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DUXBA0A1W2PPF3 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DUXBA0A1W2PPF3 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.31■■□□□ 1
DUXBA0A1W2PPF3 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
DUXBA0A1W2PPF3 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
DUXBA0A1W2PPF3 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DUXBA0A1W2PPF3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DUXBA0A1W2PPF3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.29■■□□□ 1
DUXBA0A1W2PPF3 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DUXBA0A1W2PPF3 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
DUXBA0A1W2PPF3 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DUXBA0A1W2PPF3 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DUXBA0A1W2PPF3 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
DUXBA0A1W2PPF3 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.28■■□□□ 1
DUXBA0A1W2PPF3 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DUXBA0A1W2PPF3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
DUXBA0A1W2PPF3 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC21.27■■□□□ 1
DUXBA0A1W2PPF3 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.27■□□□□ 0.99
DUXBA0A1W2PPF3 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DUXBA0A1W2PPF3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
DUXBA0A1W2PPF3 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.26■□□□□ 0.99
DUXBA0A1W2PPF3 WASH5P-204ENST00000632292 975 ntBASIC21.26■□□□□ 0.99
DUXBA0A1W2PPF3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.26■□□□□ 0.99
DUXBA0A1W2PPF3 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DUXBA0A1W2PPF3 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
DUXBA0A1W2PPF3 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DUXBA0A1W2PPF3 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DUXBA0A1W2PPF3 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DUXBA0A1W2PPF3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.24■□□□□ 0.99
DUXBA0A1W2PPF3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DUXBA0A1W2PPF3 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
DUXBA0A1W2PPF3 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
DUXBA0A1W2PPF3 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DUXBA0A1W2PPF3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.23■□□□□ 0.99
DUXBA0A1W2PPF3 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
DUXBA0A1W2PPF3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
DUXBA0A1W2PPF3 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
DUXBA0A1W2PPF3 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.22■□□□□ 0.99
DUXBA0A1W2PPF3 BX255925.1-201ENST00000566954 1854 ntBASIC21.22■□□□□ 0.99
DUXBA0A1W2PPF3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DUXBA0A1W2PPF3 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
DUXBA0A1W2PPF3 AC010864.1-201ENST00000609407 1511 ntBASIC21.21■□□□□ 0.99
DUXBA0A1W2PPF3 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DUXBA0A1W2PPF3 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
DUXBA0A1W2PPF3 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DUXBA0A1W2PPF3 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DUXBA0A1W2PPF3 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.19■□□□□ 0.98
DUXBA0A1W2PPF3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
DUXBA0A1W2PPF3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DUXBA0A1W2PPF3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DUXBA0A1W2PPF3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
DUXBA0A1W2PPF3 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
DUXBA0A1W2PPF3 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DUXBA0A1W2PPF3 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
DUXBA0A1W2PPF3 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DUXBA0A1W2PPF3 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.18■□□□□ 0.98
DUXBA0A1W2PPF3 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DUXBA0A1W2PPF3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.17■□□□□ 0.98
DUXBA0A1W2PPF3 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.17■□□□□ 0.98
DUXBA0A1W2PPF3 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
DUXBA0A1W2PPF3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DUXBA0A1W2PPF3 AP004833.2-201ENST00000532228 1454 ntBASIC21.16■□□□□ 0.98
DUXBA0A1W2PPF3 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DUXBA0A1W2PPF3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.16■□□□□ 0.98
DUXBA0A1W2PPF3 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms