Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trbv13-2A0A140T8N6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC16.88■□□□□ 0.29
Trbv13-2A0A140T8N6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC16.87■□□□□ 0.29
Trbv13-2A0A140T8N6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv13-2A0A140T8N6 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv13-2A0A140T8N6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv13-2A0A140T8N6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv13-2A0A140T8N6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv13-2A0A140T8N6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv13-2A0A140T8N6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv13-2A0A140T8N6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Trbv13-2A0A140T8N6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv13-2A0A140T8N6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv13-2A0A140T8N6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv13-2A0A140T8N6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Trbv13-2A0A140T8N6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv13-2A0A140T8N6 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC16.85■□□□□ 0.29
Trbv13-2A0A140T8N6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC16.85■□□□□ 0.29
Trbv13-2A0A140T8N6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv13-2A0A140T8N6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv13-2A0A140T8N6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv13-2A0A140T8N6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv13-2A0A140T8N6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trbv13-2A0A140T8N6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv13-2A0A140T8N6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv13-2A0A140T8N6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv13-2A0A140T8N6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Trbv13-2A0A140T8N6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv13-2A0A140T8N6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv13-2A0A140T8N6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv13-2A0A140T8N6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv13-2A0A140T8N6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trbv13-2A0A140T8N6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv13-2A0A140T8N6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv13-2A0A140T8N6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trbv13-2A0A140T8N6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv13-2A0A140T8N6 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv13-2A0A140T8N6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv13-2A0A140T8N6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv13-2A0A140T8N6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv13-2A0A140T8N6 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC16.79■□□□□ 0.28
Trbv13-2A0A140T8N6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC16.78■□□□□ 0.28
Trbv13-2A0A140T8N6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv13-2A0A140T8N6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv13-2A0A140T8N6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv13-2A0A140T8N6 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv13-2A0A140T8N6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC16.76■□□□□ 0.27
Trbv13-2A0A140T8N6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv13-2A0A140T8N6 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv13-2A0A140T8N6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC16.75■□□□□ 0.27
Trbv13-2A0A140T8N6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trbv13-2A0A140T8N6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv13-2A0A140T8N6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv13-2A0A140T8N6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv13-2A0A140T8N6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv13-2A0A140T8N6 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC16.73■□□□□ 0.27
Trbv13-2A0A140T8N6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv13-2A0A140T8N6 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv13-2A0A140T8N6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC16.71■□□□□ 0.27
Trbv13-2A0A140T8N6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv13-2A0A140T8N6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Trbv13-2A0A140T8N6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trbv13-2A0A140T8N6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trbv13-2A0A140T8N6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trbv13-2A0A140T8N6 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv13-2A0A140T8N6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv13-2A0A140T8N6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv13-2A0A140T8N6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC16.69■□□□□ 0.26
Trbv13-2A0A140T8N6 Pcf11-205ENSMUST00000208255 1720 ntBASIC16.69■□□□□ 0.26
Trbv13-2A0A140T8N6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv13-2A0A140T8N6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Trbv13-2A0A140T8N6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv13-2A0A140T8N6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trbv13-2A0A140T8N6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv13-2A0A140T8N6 Fezf2-202ENSMUST00000224023 1917 ntBASIC16.68■□□□□ 0.26
Trbv13-2A0A140T8N6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv13-2A0A140T8N6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv13-2A0A140T8N6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv13-2A0A140T8N6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC16.66■□□□□ 0.26
Trbv13-2A0A140T8N6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv13-2A0A140T8N6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv13-2A0A140T8N6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv13-2A0A140T8N6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv13-2A0A140T8N6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv13-2A0A140T8N6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv13-2A0A140T8N6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv13-2A0A140T8N6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv13-2A0A140T8N6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv13-2A0A140T8N6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv13-2A0A140T8N6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv13-2A0A140T8N6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv13-2A0A140T8N6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv13-2A0A140T8N6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv13-2A0A140T8N6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC16.61■□□□□ 0.25
Trbv13-2A0A140T8N6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv13-2A0A140T8N6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trbv13-2A0A140T8N6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv13-2A0A140T8N6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv13-2A0A140T8N6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv13-2A0A140T8N6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms