Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC29.08■■■□□ 2.25
Cfap99A0A140LIX9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC29.08■■■□□ 2.25
Cfap99A0A140LIX9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Cfap99A0A140LIX9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Cfap99A0A140LIX9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Cfap99A0A140LIX9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC29.07■■■□□ 2.24
Cfap99A0A140LIX9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Cfap99A0A140LIX9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Cfap99A0A140LIX9 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Cfap99A0A140LIX9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Cfap99A0A140LIX9 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Cfap99A0A140LIX9 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Cfap99A0A140LIX9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Cfap99A0A140LIX9 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Cfap99A0A140LIX9 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC29.04■■■□□ 2.24
Cfap99A0A140LIX9 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Cfap99A0A140LIX9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC29.03■■■□□ 2.24
Cfap99A0A140LIX9 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Cfap99A0A140LIX9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Cfap99A0A140LIX9 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
Cfap99A0A140LIX9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC29.01■■■□□ 2.23
Cfap99A0A140LIX9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Cfap99A0A140LIX9 Gm7432-201ENSMUST00000210343 879 ntBASIC29■■■□□ 2.23
Cfap99A0A140LIX9 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
Cfap99A0A140LIX9 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Cfap99A0A140LIX9 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
Cfap99A0A140LIX9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Cfap99A0A140LIX9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC28.97■■■□□ 2.23
Cfap99A0A140LIX9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC28.95■■■□□ 2.23
Cfap99A0A140LIX9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Cfap99A0A140LIX9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC28.95■■■□□ 2.22
Cfap99A0A140LIX9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
Cfap99A0A140LIX9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC28.95■■■□□ 2.22
Cfap99A0A140LIX9 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Cfap99A0A140LIX9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Cfap99A0A140LIX9 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC28.92■■■□□ 2.22
Cfap99A0A140LIX9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Cfap99A0A140LIX9 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Cfap99A0A140LIX9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Cfap99A0A140LIX9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Cfap99A0A140LIX9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Cfap99A0A140LIX9 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Cfap99A0A140LIX9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Cfap99A0A140LIX9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Cfap99A0A140LIX9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Cfap99A0A140LIX9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Cfap99A0A140LIX9 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Cfap99A0A140LIX9 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Cfap99A0A140LIX9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Cfap99A0A140LIX9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
Cfap99A0A140LIX9 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC28.82■■■□□ 2.2
Cfap99A0A140LIX9 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC28.82■■■□□ 2.2
Cfap99A0A140LIX9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Cfap99A0A140LIX9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Cfap99A0A140LIX9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC28.8■■■□□ 2.2
Cfap99A0A140LIX9 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Cfap99A0A140LIX9 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC28.79■■■□□ 2.2
Cfap99A0A140LIX9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC28.78■■■□□ 2.2
Cfap99A0A140LIX9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Cfap99A0A140LIX9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC28.78■■■□□ 2.2
Cfap99A0A140LIX9 Gm11599-201ENSMUST00000118720 878 ntBASIC28.76■■■□□ 2.19
Cfap99A0A140LIX9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
Cfap99A0A140LIX9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC28.75■■■□□ 2.19
Cfap99A0A140LIX9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Cfap99A0A140LIX9 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC28.75■■■□□ 2.19
Cfap99A0A140LIX9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Cfap99A0A140LIX9 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC28.74■■■□□ 2.19
Cfap99A0A140LIX9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC28.74■■■□□ 2.19
Cfap99A0A140LIX9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
Cfap99A0A140LIX9 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
Cfap99A0A140LIX9 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC28.73■■■□□ 2.19
Cfap99A0A140LIX9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC28.73■■■□□ 2.19
Cfap99A0A140LIX9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
Cfap99A0A140LIX9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Cfap99A0A140LIX9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Cfap99A0A140LIX9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Cfap99A0A140LIX9 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Cfap99A0A140LIX9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Cfap99A0A140LIX9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC28.71■■■□□ 2.19
Cfap99A0A140LIX9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC28.7■■■□□ 2.18
Cfap99A0A140LIX9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC28.7■■■□□ 2.18
Cfap99A0A140LIX9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Cfap99A0A140LIX9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Cfap99A0A140LIX9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Cfap99A0A140LIX9 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC28.68■■■□□ 2.18
Cfap99A0A140LIX9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Cfap99A0A140LIX9 Amer2-203ENSMUST00000225247 2662 ntBASIC28.66■■■□□ 2.18
Cfap99A0A140LIX9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC28.66■■■□□ 2.18
Cfap99A0A140LIX9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Cfap99A0A140LIX9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Cfap99A0A140LIX9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
Cfap99A0A140LIX9 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
Cfap99A0A140LIX9 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Cfap99A0A140LIX9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Cfap99A0A140LIX9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Cfap99A0A140LIX9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC28.58■■■□□ 2.17
Cfap99A0A140LIX9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC28.58■■■□□ 2.17
Cfap99A0A140LIX9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC28.58■■■□□ 2.17
Cfap99A0A140LIX9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Cfap99A0A140LIX9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC28.55■■■□□ 2.16
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms