Protein–RNA interactions for Protein: A0A0U1RP99

Ino80e, INO80 complex subunit E (Fragment), mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ino80eA0A0U1RP99 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ino80eA0A0U1RP99 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ino80eA0A0U1RP99 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ino80eA0A0U1RP99 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ino80eA0A0U1RP99 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Ino80eA0A0U1RP99 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
Ino80eA0A0U1RP99 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Ino80eA0A0U1RP99 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ino80eA0A0U1RP99 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ino80eA0A0U1RP99 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.15■□□□□ 0.82
Ino80eA0A0U1RP99 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ino80eA0A0U1RP99 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Ino80eA0A0U1RP99 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Ino80eA0A0U1RP99 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ino80eA0A0U1RP99 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ino80eA0A0U1RP99 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ino80eA0A0U1RP99 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.13■□□□□ 0.81
Ino80eA0A0U1RP99 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ino80eA0A0U1RP99 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ino80eA0A0U1RP99 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ino80eA0A0U1RP99 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ino80eA0A0U1RP99 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.09■□□□□ 0.81
Ino80eA0A0U1RP99 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ino80eA0A0U1RP99 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ino80eA0A0U1RP99 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ino80eA0A0U1RP99 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ino80eA0A0U1RP99 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.07■□□□□ 0.8
Ino80eA0A0U1RP99 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.07■□□□□ 0.8
Ino80eA0A0U1RP99 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ino80eA0A0U1RP99 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ino80eA0A0U1RP99 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ino80eA0A0U1RP99 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ino80eA0A0U1RP99 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ino80eA0A0U1RP99 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ino80eA0A0U1RP99 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ino80eA0A0U1RP99 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ino80eA0A0U1RP99 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.05■□□□□ 0.8
Ino80eA0A0U1RP99 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ino80eA0A0U1RP99 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ino80eA0A0U1RP99 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ino80eA0A0U1RP99 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ino80eA0A0U1RP99 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ino80eA0A0U1RP99 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ino80eA0A0U1RP99 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ino80eA0A0U1RP99 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Ino80eA0A0U1RP99 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Ino80eA0A0U1RP99 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ino80eA0A0U1RP99 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ino80eA0A0U1RP99 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ino80eA0A0U1RP99 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ino80eA0A0U1RP99 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Ino80eA0A0U1RP99 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.98■□□□□ 0.79
Ino80eA0A0U1RP99 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ino80eA0A0U1RP99 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.98■□□□□ 0.79
Ino80eA0A0U1RP99 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ino80eA0A0U1RP99 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Ino80eA0A0U1RP99 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ino80eA0A0U1RP99 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ino80eA0A0U1RP99 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.97■□□□□ 0.79
Ino80eA0A0U1RP99 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Ino80eA0A0U1RP99 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ino80eA0A0U1RP99 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ino80eA0A0U1RP99 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ino80eA0A0U1RP99 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ino80eA0A0U1RP99 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ino80eA0A0U1RP99 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ino80eA0A0U1RP99 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ino80eA0A0U1RP99 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ino80eA0A0U1RP99 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Ino80eA0A0U1RP99 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ino80eA0A0U1RP99 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ino80eA0A0U1RP99 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ino80eA0A0U1RP99 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Ino80eA0A0U1RP99 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ino80eA0A0U1RP99 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ino80eA0A0U1RP99 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ino80eA0A0U1RP99 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ino80eA0A0U1RP99 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ino80eA0A0U1RP99 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ino80eA0A0U1RP99 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ino80eA0A0U1RP99 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ino80eA0A0U1RP99 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Ino80eA0A0U1RP99 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ino80eA0A0U1RP99 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Ino80eA0A0U1RP99 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Ino80eA0A0U1RP99 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ino80eA0A0U1RP99 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ino80eA0A0U1RP99 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ino80eA0A0U1RP99 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ino80eA0A0U1RP99 AC153911.1-202ENSMUST00000218534 1034 ntBASIC19.89■□□□□ 0.77
Ino80eA0A0U1RP99 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ino80eA0A0U1RP99 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ino80eA0A0U1RP99 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ino80eA0A0U1RP99 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ino80eA0A0U1RP99 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ino80eA0A0U1RP99 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Ino80eA0A0U1RP99 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ino80eA0A0U1RP99 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ino80eA0A0U1RP99 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Ino80eA0A0U1RP99 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms