Protein–RNA interactions for Protein: A0A0G2JDF5

Trav14n-2, T cell receptor alpha variable 14D-2 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-2A0A0G2JDF5 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav14n-2A0A0G2JDF5 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav14n-2A0A0G2JDF5 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav14n-2A0A0G2JDF5 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC17.7■□□□□ 0.42
Trav14n-2A0A0G2JDF5 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trav14n-2A0A0G2JDF5 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav14n-2A0A0G2JDF5 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.69■□□□□ 0.42
Trav14n-2A0A0G2JDF5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav14n-2A0A0G2JDF5 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trav14n-2A0A0G2JDF5 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav14n-2A0A0G2JDF5 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav14n-2A0A0G2JDF5 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav14n-2A0A0G2JDF5 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav14n-2A0A0G2JDF5 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trav14n-2A0A0G2JDF5 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav14n-2A0A0G2JDF5 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav14n-2A0A0G2JDF5 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav14n-2A0A0G2JDF5 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav14n-2A0A0G2JDF5 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.66■□□□□ 0.42
Trav14n-2A0A0G2JDF5 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav14n-2A0A0G2JDF5 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav14n-2A0A0G2JDF5 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav14n-2A0A0G2JDF5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav14n-2A0A0G2JDF5 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Trav14n-2A0A0G2JDF5 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav14n-2A0A0G2JDF5 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav14n-2A0A0G2JDF5 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav14n-2A0A0G2JDF5 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav14n-2A0A0G2JDF5 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Trav14n-2A0A0G2JDF5 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav14n-2A0A0G2JDF5 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav14n-2A0A0G2JDF5 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC17.61■□□□□ 0.41
Trav14n-2A0A0G2JDF5 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trav14n-2A0A0G2JDF5 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav14n-2A0A0G2JDF5 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav14n-2A0A0G2JDF5 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav14n-2A0A0G2JDF5 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trav14n-2A0A0G2JDF5 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Trav14n-2A0A0G2JDF5 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav14n-2A0A0G2JDF5 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav14n-2A0A0G2JDF5 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trav14n-2A0A0G2JDF5 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav14n-2A0A0G2JDF5 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav14n-2A0A0G2JDF5 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav14n-2A0A0G2JDF5 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav14n-2A0A0G2JDF5 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav14n-2A0A0G2JDF5 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav14n-2A0A0G2JDF5 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav14n-2A0A0G2JDF5 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav14n-2A0A0G2JDF5 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav14n-2A0A0G2JDF5 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav14n-2A0A0G2JDF5 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav14n-2A0A0G2JDF5 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav14n-2A0A0G2JDF5 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav14n-2A0A0G2JDF5 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trav14n-2A0A0G2JDF5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav14n-2A0A0G2JDF5 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.54■□□□□ 0.4
Trav14n-2A0A0G2JDF5 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav14n-2A0A0G2JDF5 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav14n-2A0A0G2JDF5 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav14n-2A0A0G2JDF5 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav14n-2A0A0G2JDF5 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav14n-2A0A0G2JDF5 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav14n-2A0A0G2JDF5 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Trav14n-2A0A0G2JDF5 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC17.52■□□□□ 0.4
Trav14n-2A0A0G2JDF5 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav14n-2A0A0G2JDF5 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav14n-2A0A0G2JDF5 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav14n-2A0A0G2JDF5 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.51■□□□□ 0.39
Trav14n-2A0A0G2JDF5 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav14n-2A0A0G2JDF5 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav14n-2A0A0G2JDF5 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC17.5■□□□□ 0.39
Trav14n-2A0A0G2JDF5 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav14n-2A0A0G2JDF5 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav14n-2A0A0G2JDF5 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav14n-2A0A0G2JDF5 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav14n-2A0A0G2JDF5 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav14n-2A0A0G2JDF5 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav14n-2A0A0G2JDF5 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Trav14n-2A0A0G2JDF5 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav14n-2A0A0G2JDF5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav14n-2A0A0G2JDF5 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav14n-2A0A0G2JDF5 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav14n-2A0A0G2JDF5 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.47■□□□□ 0.39
Trav14n-2A0A0G2JDF5 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav14n-2A0A0G2JDF5 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Trav14n-2A0A0G2JDF5 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trav14n-2A0A0G2JDF5 AC122428.3-201ENSMUST00000215551 2290 ntBASIC17.47■□□□□ 0.39
Trav14n-2A0A0G2JDF5 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav14n-2A0A0G2JDF5 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav14n-2A0A0G2JDF5 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav14n-2A0A0G2JDF5 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trav14n-2A0A0G2JDF5 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.46■□□□□ 0.38
Trav14n-2A0A0G2JDF5 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.45■□□□□ 0.38
Trav14n-2A0A0G2JDF5 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav14n-2A0A0G2JDF5 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav14n-2A0A0G2JDF5 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.45■□□□□ 0.38
Trav14n-2A0A0G2JDF5 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Trav14n-2A0A0G2JDF5 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav14n-2A0A0G2JDF5 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms