Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.75■■□□□ 1.07
IGHV3-43A0A0B4J1X8 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
IGHV3-43A0A0B4J1X8 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
IGHV3-43A0A0B4J1X8 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
IGHV3-43A0A0B4J1X8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
IGHV3-43A0A0B4J1X8 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21.74■■□□□ 1.07
IGHV3-43A0A0B4J1X8 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
IGHV3-43A0A0B4J1X8 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
IGHV3-43A0A0B4J1X8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
IGHV3-43A0A0B4J1X8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
IGHV3-43A0A0B4J1X8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
IGHV3-43A0A0B4J1X8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
IGHV3-43A0A0B4J1X8 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
IGHV3-43A0A0B4J1X8 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
IGHV3-43A0A0B4J1X8 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
IGHV3-43A0A0B4J1X8 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
IGHV3-43A0A0B4J1X8 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.7■■□□□ 1.06
IGHV3-43A0A0B4J1X8 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
IGHV3-43A0A0B4J1X8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
IGHV3-43A0A0B4J1X8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
IGHV3-43A0A0B4J1X8 AC010864.1-201ENST00000609407 1511 ntBASIC21.69■■□□□ 1.06
IGHV3-43A0A0B4J1X8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.69■■□□□ 1.06
IGHV3-43A0A0B4J1X8 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
IGHV3-43A0A0B4J1X8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
IGHV3-43A0A0B4J1X8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.68■■□□□ 1.06
IGHV3-43A0A0B4J1X8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.68■■□□□ 1.06
IGHV3-43A0A0B4J1X8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
IGHV3-43A0A0B4J1X8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
IGHV3-43A0A0B4J1X8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.65■■□□□ 1.06
IGHV3-43A0A0B4J1X8 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
IGHV3-43A0A0B4J1X8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
IGHV3-43A0A0B4J1X8 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.64■■□□□ 1.05
IGHV3-43A0A0B4J1X8 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
IGHV3-43A0A0B4J1X8 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
IGHV3-43A0A0B4J1X8 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.63■■□□□ 1.05
IGHV3-43A0A0B4J1X8 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
IGHV3-43A0A0B4J1X8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
IGHV3-43A0A0B4J1X8 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
IGHV3-43A0A0B4J1X8 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
IGHV3-43A0A0B4J1X8 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
IGHV3-43A0A0B4J1X8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
IGHV3-43A0A0B4J1X8 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
IGHV3-43A0A0B4J1X8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
IGHV3-43A0A0B4J1X8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
IGHV3-43A0A0B4J1X8 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
IGHV3-43A0A0B4J1X8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
IGHV3-43A0A0B4J1X8 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.59■■□□□ 1.05
IGHV3-43A0A0B4J1X8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.58■■□□□ 1.05
IGHV3-43A0A0B4J1X8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
IGHV3-43A0A0B4J1X8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
IGHV3-43A0A0B4J1X8 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.57■■□□□ 1.04
IGHV3-43A0A0B4J1X8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.57■■□□□ 1.04
IGHV3-43A0A0B4J1X8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
IGHV3-43A0A0B4J1X8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
IGHV3-43A0A0B4J1X8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
IGHV3-43A0A0B4J1X8 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
IGHV3-43A0A0B4J1X8 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
IGHV3-43A0A0B4J1X8 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
IGHV3-43A0A0B4J1X8 AL139393.2-201ENST00000608721 2025 ntBASIC21.56■■□□□ 1.04
IGHV3-43A0A0B4J1X8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
IGHV3-43A0A0B4J1X8 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.55■■□□□ 1.04
IGHV3-43A0A0B4J1X8 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.55■■□□□ 1.04
IGHV3-43A0A0B4J1X8 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
IGHV3-43A0A0B4J1X8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.55■■□□□ 1.04
IGHV3-43A0A0B4J1X8 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
IGHV3-43A0A0B4J1X8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
IGHV3-43A0A0B4J1X8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
IGHV3-43A0A0B4J1X8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
IGHV3-43A0A0B4J1X8 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
IGHV3-43A0A0B4J1X8 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
IGHV3-43A0A0B4J1X8 MIR762-201ENST00000390236 83 ntBASIC21.54■■□□□ 1.04
IGHV3-43A0A0B4J1X8 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
IGHV3-43A0A0B4J1X8 SUZ12P1-203ENST00000578195 985 ntBASIC21.54■■□□□ 1.04
IGHV3-43A0A0B4J1X8 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
IGHV3-43A0A0B4J1X8 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
IGHV3-43A0A0B4J1X8 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
IGHV3-43A0A0B4J1X8 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.52■■□□□ 1.04
IGHV3-43A0A0B4J1X8 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
IGHV3-43A0A0B4J1X8 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
IGHV3-43A0A0B4J1X8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
IGHV3-43A0A0B4J1X8 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
IGHV3-43A0A0B4J1X8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
IGHV3-43A0A0B4J1X8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.51■■□□□ 1.03
IGHV3-43A0A0B4J1X8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.51■■□□□ 1.03
IGHV3-43A0A0B4J1X8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
IGHV3-43A0A0B4J1X8 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
IGHV3-43A0A0B4J1X8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
IGHV3-43A0A0B4J1X8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
IGHV3-43A0A0B4J1X8 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
IGHV3-43A0A0B4J1X8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
IGHV3-43A0A0B4J1X8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.49■■□□□ 1.03
IGHV3-43A0A0B4J1X8 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
IGHV3-43A0A0B4J1X8 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
IGHV3-43A0A0B4J1X8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
IGHV3-43A0A0B4J1X8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
IGHV3-43A0A0B4J1X8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
IGHV3-43A0A0B4J1X8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
IGHV3-43A0A0B4J1X8 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.47■■□□□ 1.03
IGHV3-43A0A0B4J1X8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
IGHV3-43A0A0B4J1X8 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms