Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV9A0A0B4J1U6 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TRBV9A0A0B4J1U6 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
TRBV9A0A0B4J1U6 AL135925.1-201ENST00000605920 1701 ntBASIC20.73■□□□□ 0.91
TRBV9A0A0B4J1U6 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.73■□□□□ 0.91
TRBV9A0A0B4J1U6 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRBV9A0A0B4J1U6 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV9A0A0B4J1U6 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV9A0A0B4J1U6 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.72■□□□□ 0.91
TRBV9A0A0B4J1U6 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV9A0A0B4J1U6 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV9A0A0B4J1U6 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV9A0A0B4J1U6 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV9A0A0B4J1U6 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TRBV9A0A0B4J1U6 ST7-AS1-201ENST00000456775 1889 ntBASIC20.71■□□□□ 0.91
TRBV9A0A0B4J1U6 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV9A0A0B4J1U6 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRBV9A0A0B4J1U6 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRBV9A0A0B4J1U6 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRBV9A0A0B4J1U6 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV9A0A0B4J1U6 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.69■□□□□ 0.9
TRBV9A0A0B4J1U6 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV9A0A0B4J1U6 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV9A0A0B4J1U6 MIR762-201ENST00000390236 83 ntBASIC20.67■□□□□ 0.9
TRBV9A0A0B4J1U6 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.67■□□□□ 0.9
TRBV9A0A0B4J1U6 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV9A0A0B4J1U6 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.66■□□□□ 0.9
TRBV9A0A0B4J1U6 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TRBV9A0A0B4J1U6 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV9A0A0B4J1U6 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV9A0A0B4J1U6 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
TRBV9A0A0B4J1U6 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
TRBV9A0A0B4J1U6 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
TRBV9A0A0B4J1U6 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRBV9A0A0B4J1U6 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.64■□□□□ 0.89
TRBV9A0A0B4J1U6 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRBV9A0A0B4J1U6 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRBV9A0A0B4J1U6 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRBV9A0A0B4J1U6 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.63■□□□□ 0.89
TRBV9A0A0B4J1U6 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.63■□□□□ 0.89
TRBV9A0A0B4J1U6 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRBV9A0A0B4J1U6 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
TRBV9A0A0B4J1U6 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRBV9A0A0B4J1U6 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRBV9A0A0B4J1U6 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRBV9A0A0B4J1U6 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.62■□□□□ 0.89
TRBV9A0A0B4J1U6 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRBV9A0A0B4J1U6 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.62■□□□□ 0.89
TRBV9A0A0B4J1U6 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.61■□□□□ 0.89
TRBV9A0A0B4J1U6 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV9A0A0B4J1U6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV9A0A0B4J1U6 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV9A0A0B4J1U6 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV9A0A0B4J1U6 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRBV9A0A0B4J1U6 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.6■□□□□ 0.89
TRBV9A0A0B4J1U6 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.6■□□□□ 0.89
TRBV9A0A0B4J1U6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TRBV9A0A0B4J1U6 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV9A0A0B4J1U6 AC010864.1-201ENST00000609407 1511 ntBASIC20.59■□□□□ 0.89
TRBV9A0A0B4J1U6 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV9A0A0B4J1U6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV9A0A0B4J1U6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV9A0A0B4J1U6 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV9A0A0B4J1U6 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRBV9A0A0B4J1U6 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.58■□□□□ 0.89
TRBV9A0A0B4J1U6 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRBV9A0A0B4J1U6 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV9A0A0B4J1U6 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV9A0A0B4J1U6 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
TRBV9A0A0B4J1U6 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TRBV9A0A0B4J1U6 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV9A0A0B4J1U6 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.56■□□□□ 0.88
TRBV9A0A0B4J1U6 AC005559.1-201ENST00000589661 871 ntBASIC20.56■□□□□ 0.88
TRBV9A0A0B4J1U6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV9A0A0B4J1U6 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV9A0A0B4J1U6 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV9A0A0B4J1U6 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRBV9A0A0B4J1U6 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TRBV9A0A0B4J1U6 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
TRBV9A0A0B4J1U6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRBV9A0A0B4J1U6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRBV9A0A0B4J1U6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV9A0A0B4J1U6 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TRBV9A0A0B4J1U6 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TRBV9A0A0B4J1U6 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV9A0A0B4J1U6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV9A0A0B4J1U6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRBV9A0A0B4J1U6 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRBV9A0A0B4J1U6 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRBV9A0A0B4J1U6 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.52■□□□□ 0.88
TRBV9A0A0B4J1U6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.87
TRBV9A0A0B4J1U6 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
TRBV9A0A0B4J1U6 AP006261.1-201ENST00000584783 668 ntBASIC20.51■□□□□ 0.87
TRBV9A0A0B4J1U6 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.51■□□□□ 0.87
TRBV9A0A0B4J1U6 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRBV9A0A0B4J1U6 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRBV9A0A0B4J1U6 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
TRBV9A0A0B4J1U6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.5■□□□□ 0.87
TRBV9A0A0B4J1U6 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRBV9A0A0B4J1U6 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms