Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tcrg-V4A0A0B4J1J8 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tcrg-V4A0A0B4J1J8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tcrg-V4A0A0B4J1J8 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tcrg-V4A0A0B4J1J8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.18■□□□□ 0.5
Tcrg-V4A0A0B4J1J8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tcrg-V4A0A0B4J1J8 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tcrg-V4A0A0B4J1J8 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tcrg-V4A0A0B4J1J8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tcrg-V4A0A0B4J1J8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tcrg-V4A0A0B4J1J8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Tcrg-V4A0A0B4J1J8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.17■□□□□ 0.5
Tcrg-V4A0A0B4J1J8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tcrg-V4A0A0B4J1J8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Tcrg-V4A0A0B4J1J8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Tcrg-V4A0A0B4J1J8 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.16■□□□□ 0.5
Tcrg-V4A0A0B4J1J8 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tcrg-V4A0A0B4J1J8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tcrg-V4A0A0B4J1J8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tcrg-V4A0A0B4J1J8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tcrg-V4A0A0B4J1J8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tcrg-V4A0A0B4J1J8 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tcrg-V4A0A0B4J1J8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Tcrg-V4A0A0B4J1J8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.14■□□□□ 0.5
Tcrg-V4A0A0B4J1J8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tcrg-V4A0A0B4J1J8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tcrg-V4A0A0B4J1J8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.13■□□□□ 0.49
Tcrg-V4A0A0B4J1J8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Tcrg-V4A0A0B4J1J8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tcrg-V4A0A0B4J1J8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC18.13■□□□□ 0.49
Tcrg-V4A0A0B4J1J8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Tcrg-V4A0A0B4J1J8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC18.12■□□□□ 0.49
Tcrg-V4A0A0B4J1J8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Tcrg-V4A0A0B4J1J8 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tcrg-V4A0A0B4J1J8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Tcrg-V4A0A0B4J1J8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tcrg-V4A0A0B4J1J8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
Tcrg-V4A0A0B4J1J8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tcrg-V4A0A0B4J1J8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tcrg-V4A0A0B4J1J8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tcrg-V4A0A0B4J1J8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tcrg-V4A0A0B4J1J8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tcrg-V4A0A0B4J1J8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC18.08■□□□□ 0.49
Tcrg-V4A0A0B4J1J8 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.08■□□□□ 0.48
Tcrg-V4A0A0B4J1J8 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
Tcrg-V4A0A0B4J1J8 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tcrg-V4A0A0B4J1J8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tcrg-V4A0A0B4J1J8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tcrg-V4A0A0B4J1J8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tcrg-V4A0A0B4J1J8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tcrg-V4A0A0B4J1J8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tcrg-V4A0A0B4J1J8 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tcrg-V4A0A0B4J1J8 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tcrg-V4A0A0B4J1J8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tcrg-V4A0A0B4J1J8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.06■□□□□ 0.48
Tcrg-V4A0A0B4J1J8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.06■□□□□ 0.48
Tcrg-V4A0A0B4J1J8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tcrg-V4A0A0B4J1J8 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tcrg-V4A0A0B4J1J8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tcrg-V4A0A0B4J1J8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tcrg-V4A0A0B4J1J8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tcrg-V4A0A0B4J1J8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Tcrg-V4A0A0B4J1J8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tcrg-V4A0A0B4J1J8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
Tcrg-V4A0A0B4J1J8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tcrg-V4A0A0B4J1J8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tcrg-V4A0A0B4J1J8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tcrg-V4A0A0B4J1J8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Tcrg-V4A0A0B4J1J8 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tcrg-V4A0A0B4J1J8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Tcrg-V4A0A0B4J1J8 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tcrg-V4A0A0B4J1J8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tcrg-V4A0A0B4J1J8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tcrg-V4A0A0B4J1J8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tcrg-V4A0A0B4J1J8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Tcrg-V4A0A0B4J1J8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tcrg-V4A0A0B4J1J8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Tcrg-V4A0A0B4J1J8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tcrg-V4A0A0B4J1J8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tcrg-V4A0A0B4J1J8 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tcrg-V4A0A0B4J1J8 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Tcrg-V4A0A0B4J1J8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Tcrg-V4A0A0B4J1J8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
Tcrg-V4A0A0B4J1J8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tcrg-V4A0A0B4J1J8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tcrg-V4A0A0B4J1J8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tcrg-V4A0A0B4J1J8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tcrg-V4A0A0B4J1J8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tcrg-V4A0A0B4J1J8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Tcrg-V4A0A0B4J1J8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tcrg-V4A0A0B4J1J8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tcrg-V4A0A0B4J1J8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tcrg-V4A0A0B4J1J8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tcrg-V4A0A0B4J1J8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tcrg-V4A0A0B4J1J8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tcrg-V4A0A0B4J1J8 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tcrg-V4A0A0B4J1J8 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tcrg-V4A0A0B4J1J8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tcrg-V4A0A0B4J1J8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC17.93■□□□□ 0.46
Tcrg-V4A0A0B4J1J8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms