Protein–RNA interactions for Protein: A0A075B6N1

TRBV19, T-cell receptor beta variable 19 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV19A0A075B6N1 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV19A0A075B6N1 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TRBV19A0A075B6N1 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV19A0A075B6N1 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV19A0A075B6N1 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV19A0A075B6N1 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBV19A0A075B6N1 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV19A0A075B6N1 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV19A0A075B6N1 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV19A0A075B6N1 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV19A0A075B6N1 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20■□□□□ 0.79
TRBV19A0A075B6N1 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRBV19A0A075B6N1 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20■□□□□ 0.79
TRBV19A0A075B6N1 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20■□□□□ 0.79
TRBV19A0A075B6N1 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRBV19A0A075B6N1 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20■□□□□ 0.79
TRBV19A0A075B6N1 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRBV19A0A075B6N1 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV19A0A075B6N1 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV19A0A075B6N1 AL133380.1-201ENST00000506013 324 ntBASIC19.99■□□□□ 0.79
TRBV19A0A075B6N1 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
TRBV19A0A075B6N1 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV19A0A075B6N1 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.98■□□□□ 0.79
TRBV19A0A075B6N1 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV19A0A075B6N1 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV19A0A075B6N1 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV19A0A075B6N1 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV19A0A075B6N1 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV19A0A075B6N1 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV19A0A075B6N1 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV19A0A075B6N1 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
TRBV19A0A075B6N1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
TRBV19A0A075B6N1 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV19A0A075B6N1 DRD5P2-201ENST00000421395 2012 ntBASIC19.96■□□□□ 0.79
TRBV19A0A075B6N1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV19A0A075B6N1 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV19A0A075B6N1 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV19A0A075B6N1 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
TRBV19A0A075B6N1 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.95■□□□□ 0.78
TRBV19A0A075B6N1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV19A0A075B6N1 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV19A0A075B6N1 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV19A0A075B6N1 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
TRBV19A0A075B6N1 AC010864.1-201ENST00000609407 1511 ntBASIC19.93■□□□□ 0.78
TRBV19A0A075B6N1 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.93■□□□□ 0.78
TRBV19A0A075B6N1 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV19A0A075B6N1 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.92■□□□□ 0.78
TRBV19A0A075B6N1 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TRBV19A0A075B6N1 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV19A0A075B6N1 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV19A0A075B6N1 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV19A0A075B6N1 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
TRBV19A0A075B6N1 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
TRBV19A0A075B6N1 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.89■□□□□ 0.77
TRBV19A0A075B6N1 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
TRBV19A0A075B6N1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.88■□□□□ 0.77
TRBV19A0A075B6N1 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.88■□□□□ 0.77
TRBV19A0A075B6N1 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TRBV19A0A075B6N1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRBV19A0A075B6N1 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TRBV19A0A075B6N1 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRBV19A0A075B6N1 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
TRBV19A0A075B6N1 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV19A0A075B6N1 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV19A0A075B6N1 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV19A0A075B6N1 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV19A0A075B6N1 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.84■□□□□ 0.77
TRBV19A0A075B6N1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.84■□□□□ 0.77
TRBV19A0A075B6N1 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
TRBV19A0A075B6N1 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.84■□□□□ 0.77
TRBV19A0A075B6N1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
TRBV19A0A075B6N1 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRBV19A0A075B6N1 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TRBV19A0A075B6N1 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV19A0A075B6N1 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
TRBV19A0A075B6N1 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV19A0A075B6N1 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV19A0A075B6N1 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV19A0A075B6N1 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV19A0A075B6N1 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV19A0A075B6N1 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV19A0A075B6N1 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
TRBV19A0A075B6N1 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV19A0A075B6N1 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV19A0A075B6N1 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV19A0A075B6N1 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRBV19A0A075B6N1 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC19.77■□□□□ 0.76
TRBV19A0A075B6N1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC19.77■□□□□ 0.76
TRBV19A0A075B6N1 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV19A0A075B6N1 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV19A0A075B6N1 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TRBV19A0A075B6N1 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV19A0A075B6N1 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV19A0A075B6N1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TRBV19A0A075B6N1 AL121749.1-202ENST00000609313 2153 ntBASIC19.76■□□□□ 0.75
TRBV19A0A075B6N1 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV19A0A075B6N1 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV19A0A075B6N1 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV19A0A075B6N1 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV19A0A075B6N1 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms