Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav12d-3A0A075B6A4 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav12d-3A0A075B6A4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav12d-3A0A075B6A4 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav12d-3A0A075B6A4 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav12d-3A0A075B6A4 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Trav12d-3A0A075B6A4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav12d-3A0A075B6A4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav12d-3A0A075B6A4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav12d-3A0A075B6A4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav12d-3A0A075B6A4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav12d-3A0A075B6A4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav12d-3A0A075B6A4 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav12d-3A0A075B6A4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC18.18■□□□□ 0.5
Trav12d-3A0A075B6A4 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Trav12d-3A0A075B6A4 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav12d-3A0A075B6A4 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav12d-3A0A075B6A4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Trav12d-3A0A075B6A4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav12d-3A0A075B6A4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav12d-3A0A075B6A4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trav12d-3A0A075B6A4 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.15■□□□□ 0.5
Trav12d-3A0A075B6A4 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.15■□□□□ 0.5
Trav12d-3A0A075B6A4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.14■□□□□ 0.5
Trav12d-3A0A075B6A4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav12d-3A0A075B6A4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav12d-3A0A075B6A4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav12d-3A0A075B6A4 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav12d-3A0A075B6A4 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Trav12d-3A0A075B6A4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav12d-3A0A075B6A4 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC18.12■□□□□ 0.49
Trav12d-3A0A075B6A4 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav12d-3A0A075B6A4 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav12d-3A0A075B6A4 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav12d-3A0A075B6A4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav12d-3A0A075B6A4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav12d-3A0A075B6A4 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav12d-3A0A075B6A4 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trav12d-3A0A075B6A4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav12d-3A0A075B6A4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trav12d-3A0A075B6A4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trav12d-3A0A075B6A4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trav12d-3A0A075B6A4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav12d-3A0A075B6A4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav12d-3A0A075B6A4 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav12d-3A0A075B6A4 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Trav12d-3A0A075B6A4 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav12d-3A0A075B6A4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trav12d-3A0A075B6A4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav12d-3A0A075B6A4 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.06■□□□□ 0.48
Trav12d-3A0A075B6A4 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav12d-3A0A075B6A4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav12d-3A0A075B6A4 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.05■□□□□ 0.48
Trav12d-3A0A075B6A4 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
Trav12d-3A0A075B6A4 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav12d-3A0A075B6A4 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Trav12d-3A0A075B6A4 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.04■□□□□ 0.48
Trav12d-3A0A075B6A4 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.04■□□□□ 0.48
Trav12d-3A0A075B6A4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.03■□□□□ 0.48
Trav12d-3A0A075B6A4 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav12d-3A0A075B6A4 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav12d-3A0A075B6A4 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav12d-3A0A075B6A4 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav12d-3A0A075B6A4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trav12d-3A0A075B6A4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav12d-3A0A075B6A4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trav12d-3A0A075B6A4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Trav12d-3A0A075B6A4 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Trav12d-3A0A075B6A4 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.01■□□□□ 0.47
Trav12d-3A0A075B6A4 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav12d-3A0A075B6A4 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Trav12d-3A0A075B6A4 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav12d-3A0A075B6A4 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav12d-3A0A075B6A4 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav12d-3A0A075B6A4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav12d-3A0A075B6A4 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav12d-3A0A075B6A4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav12d-3A0A075B6A4 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Trav12d-3A0A075B6A4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav12d-3A0A075B6A4 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav12d-3A0A075B6A4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC17.97■□□□□ 0.47
Trav12d-3A0A075B6A4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav12d-3A0A075B6A4 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav12d-3A0A075B6A4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav12d-3A0A075B6A4 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav12d-3A0A075B6A4 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav12d-3A0A075B6A4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav12d-3A0A075B6A4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
Trav12d-3A0A075B6A4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav12d-3A0A075B6A4 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav12d-3A0A075B6A4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav12d-3A0A075B6A4 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.46
Trav12d-3A0A075B6A4 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav12d-3A0A075B6A4 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav12d-3A0A075B6A4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.95■□□□□ 0.46
Trav12d-3A0A075B6A4 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trav12d-3A0A075B6A4 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav12d-3A0A075B6A4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav12d-3A0A075B6A4 Gm25238-201ENSMUST00000174914 89 ntBASIC17.94■□□□□ 0.46
Trav12d-3A0A075B6A4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms