Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav13-2A0A075B649 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav13-2A0A075B649 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC16.14■□□□□ 0.17
Trav13-2A0A075B649 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trav13-2A0A075B649 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trav13-2A0A075B649 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trav13-2A0A075B649 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC16.14■□□□□ 0.17
Trav13-2A0A075B649 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav13-2A0A075B649 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav13-2A0A075B649 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav13-2A0A075B649 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Trav13-2A0A075B649 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav13-2A0A075B649 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trav13-2A0A075B649 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav13-2A0A075B649 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav13-2A0A075B649 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13-2A0A075B649 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13-2A0A075B649 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13-2A0A075B649 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13-2A0A075B649 Peli2-204ENSMUST00000226513 1320 ntBASIC16.11■□□□□ 0.17
Trav13-2A0A075B649 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13-2A0A075B649 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav13-2A0A075B649 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13-2A0A075B649 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13-2A0A075B649 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13-2A0A075B649 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Trav13-2A0A075B649 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13-2A0A075B649 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13-2A0A075B649 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC16.07■□□□□ 0.16
Trav13-2A0A075B649 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13-2A0A075B649 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13-2A0A075B649 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
Trav13-2A0A075B649 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav13-2A0A075B649 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav13-2A0A075B649 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trav13-2A0A075B649 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav13-2A0A075B649 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13-2A0A075B649 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13-2A0A075B649 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trav13-2A0A075B649 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13-2A0A075B649 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13-2A0A075B649 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trav13-2A0A075B649 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
Trav13-2A0A075B649 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13-2A0A075B649 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13-2A0A075B649 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13-2A0A075B649 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13-2A0A075B649 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13-2A0A075B649 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13-2A0A075B649 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Trav13-2A0A075B649 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trav13-2A0A075B649 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Trav13-2A0A075B649 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav13-2A0A075B649 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav13-2A0A075B649 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav13-2A0A075B649 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trav13-2A0A075B649 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav13-2A0A075B649 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav13-2A0A075B649 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav13-2A0A075B649 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13-2A0A075B649 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13-2A0A075B649 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16■□□□□ 0.15
Trav13-2A0A075B649 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13-2A0A075B649 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16■□□□□ 0.15
Trav13-2A0A075B649 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13-2A0A075B649 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13-2A0A075B649 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC15.99■□□□□ 0.15
Trav13-2A0A075B649 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13-2A0A075B649 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13-2A0A075B649 Gm8109-201ENSMUST00000194076 746 ntBASIC15.98■□□□□ 0.15
Trav13-2A0A075B649 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Trav13-2A0A075B649 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13-2A0A075B649 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav13-2A0A075B649 Gm26115-201ENSMUST00000175605 87 ntBASIC15.96■□□□□ 0.15
Trav13-2A0A075B649 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trav13-2A0A075B649 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav13-2A0A075B649 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav13-2A0A075B649 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13-2A0A075B649 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13-2A0A075B649 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13-2A0A075B649 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13-2A0A075B649 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13-2A0A075B649 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13-2A0A075B649 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13-2A0A075B649 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13-2A0A075B649 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trav13-2A0A075B649 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
Trav13-2A0A075B649 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13-2A0A075B649 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13-2A0A075B649 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13-2A0A075B649 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
Trav13-2A0A075B649 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13-2A0A075B649 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13-2A0A075B649 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Trav13-2A0A075B649 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13-2A0A075B649 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13-2A0A075B649 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trav13-2A0A075B649 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13-2A0A075B649 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trav13-2A0A075B649 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms