Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav9n-4A0A075B631 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav9n-4A0A075B631 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav9n-4A0A075B631 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav9n-4A0A075B631 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav9n-4A0A075B631 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav9n-4A0A075B631 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.47■□□□□ 0.23
Trav9n-4A0A075B631 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav9n-4A0A075B631 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav9n-4A0A075B631 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav9n-4A0A075B631 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trav9n-4A0A075B631 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav9n-4A0A075B631 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav9n-4A0A075B631 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trav9n-4A0A075B631 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav9n-4A0A075B631 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav9n-4A0A075B631 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav9n-4A0A075B631 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav9n-4A0A075B631 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav9n-4A0A075B631 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav9n-4A0A075B631 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Trav9n-4A0A075B631 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav9n-4A0A075B631 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Trav9n-4A0A075B631 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9n-4A0A075B631 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9n-4A0A075B631 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9n-4A0A075B631 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9n-4A0A075B631 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9n-4A0A075B631 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trav9n-4A0A075B631 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC16.42■□□□□ 0.22
Trav9n-4A0A075B631 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9n-4A0A075B631 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9n-4A0A075B631 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9n-4A0A075B631 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9n-4A0A075B631 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9n-4A0A075B631 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9n-4A0A075B631 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9n-4A0A075B631 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9n-4A0A075B631 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9n-4A0A075B631 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9n-4A0A075B631 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav9n-4A0A075B631 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav9n-4A0A075B631 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav9n-4A0A075B631 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Trav9n-4A0A075B631 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav9n-4A0A075B631 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav9n-4A0A075B631 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav9n-4A0A075B631 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav9n-4A0A075B631 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav9n-4A0A075B631 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav9n-4A0A075B631 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav9n-4A0A075B631 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav9n-4A0A075B631 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav9n-4A0A075B631 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav9n-4A0A075B631 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav9n-4A0A075B631 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9n-4A0A075B631 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9n-4A0A075B631 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9n-4A0A075B631 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trav9n-4A0A075B631 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9n-4A0A075B631 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav9n-4A0A075B631 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav9n-4A0A075B631 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav9n-4A0A075B631 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav9n-4A0A075B631 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav9n-4A0A075B631 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav9n-4A0A075B631 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav9n-4A0A075B631 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav9n-4A0A075B631 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC16.32■□□□□ 0.2
Trav9n-4A0A075B631 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav9n-4A0A075B631 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Trav9n-4A0A075B631 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav9n-4A0A075B631 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav9n-4A0A075B631 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav9n-4A0A075B631 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav9n-4A0A075B631 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trav9n-4A0A075B631 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav9n-4A0A075B631 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav9n-4A0A075B631 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav9n-4A0A075B631 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav9n-4A0A075B631 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Trav9n-4A0A075B631 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav9n-4A0A075B631 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC16.3■□□□□ 0.2
Trav9n-4A0A075B631 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9n-4A0A075B631 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9n-4A0A075B631 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9n-4A0A075B631 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9n-4A0A075B631 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trav9n-4A0A075B631 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9n-4A0A075B631 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9n-4A0A075B631 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav9n-4A0A075B631 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav9n-4A0A075B631 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav9n-4A0A075B631 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav9n-4A0A075B631 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC16.26■□□□□ 0.19
Trav9n-4A0A075B631 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav9n-4A0A075B631 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav9n-4A0A075B631 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trav9n-4A0A075B631 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav9n-4A0A075B631 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms