Protein–RNA interactions for Protein: A0A075B622

Trav10n, T cell receptor alpha variable 10N (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10nA0A075B622 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Trav10nA0A075B622 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.56■■□□□ 1.04
Trav10nA0A075B622 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.55■■□□□ 1.04
Trav10nA0A075B622 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trav10nA0A075B622 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trav10nA0A075B622 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trav10nA0A075B622 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Trav10nA0A075B622 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trav10nA0A075B622 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trav10nA0A075B622 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trav10nA0A075B622 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trav10nA0A075B622 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Trav10nA0A075B622 Gm24970-201ENSMUST00000175582 82 ntBASIC21.52■■□□□ 1.04
Trav10nA0A075B622 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trav10nA0A075B622 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.51■■□□□ 1.03
Trav10nA0A075B622 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trav10nA0A075B622 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trav10nA0A075B622 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trav10nA0A075B622 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.5■■□□□ 1.03
Trav10nA0A075B622 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trav10nA0A075B622 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trav10nA0A075B622 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trav10nA0A075B622 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.49■■□□□ 1.03
Trav10nA0A075B622 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trav10nA0A075B622 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trav10nA0A075B622 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.48■■□□□ 1.03
Trav10nA0A075B622 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trav10nA0A075B622 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trav10nA0A075B622 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.48■■□□□ 1.03
Trav10nA0A075B622 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trav10nA0A075B622 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trav10nA0A075B622 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trav10nA0A075B622 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trav10nA0A075B622 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trav10nA0A075B622 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trav10nA0A075B622 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trav10nA0A075B622 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.45■■□□□ 1.02
Trav10nA0A075B622 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trav10nA0A075B622 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
Trav10nA0A075B622 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Trav10nA0A075B622 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trav10nA0A075B622 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trav10nA0A075B622 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trav10nA0A075B622 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trav10nA0A075B622 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Trav10nA0A075B622 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trav10nA0A075B622 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trav10nA0A075B622 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Trav10nA0A075B622 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Trav10nA0A075B622 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.39■■□□□ 1.01
Trav10nA0A075B622 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.39■■□□□ 1.01
Trav10nA0A075B622 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trav10nA0A075B622 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
Trav10nA0A075B622 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trav10nA0A075B622 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trav10nA0A075B622 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.37■■□□□ 1.01
Trav10nA0A075B622 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.37■■□□□ 1.01
Trav10nA0A075B622 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trav10nA0A075B622 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Trav10nA0A075B622 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trav10nA0A075B622 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Trav10nA0A075B622 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trav10nA0A075B622 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.34■■□□□ 1.01
Trav10nA0A075B622 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trav10nA0A075B622 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trav10nA0A075B622 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trav10nA0A075B622 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trav10nA0A075B622 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Trav10nA0A075B622 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trav10nA0A075B622 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trav10nA0A075B622 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trav10nA0A075B622 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.28■■□□□ 1
Trav10nA0A075B622 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trav10nA0A075B622 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trav10nA0A075B622 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trav10nA0A075B622 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trav10nA0A075B622 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Trav10nA0A075B622 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trav10nA0A075B622 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trav10nA0A075B622 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trav10nA0A075B622 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trav10nA0A075B622 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.25■□□□□ 0.99
Trav10nA0A075B622 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trav10nA0A075B622 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Trav10nA0A075B622 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Trav10nA0A075B622 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.24■□□□□ 0.99
Trav10nA0A075B622 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trav10nA0A075B622 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trav10nA0A075B622 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trav10nA0A075B622 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trav10nA0A075B622 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trav10nA0A075B622 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trav10nA0A075B622 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trav10nA0A075B622 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trav10nA0A075B622 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.22■□□□□ 0.99
Trav10nA0A075B622 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trav10nA0A075B622 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.2■□□□□ 0.98
Trav10nA0A075B622 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Trav10nA0A075B622 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trav10nA0A075B622 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms