Protein–RNA interactions for Protein: Q6ZMY6

WDR88, WD repeat-containing protein 88, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WDR88Q6ZMY6 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
WDR88Q6ZMY6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
WDR88Q6ZMY6 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
WDR88Q6ZMY6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
WDR88Q6ZMY6 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.66■□□□□ 0.58
WDR88Q6ZMY6 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
WDR88Q6ZMY6 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
WDR88Q6ZMY6 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
WDR88Q6ZMY6 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.66■□□□□ 0.58
WDR88Q6ZMY6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
WDR88Q6ZMY6 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
WDR88Q6ZMY6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.66■□□□□ 0.58
WDR88Q6ZMY6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.66■□□□□ 0.58
WDR88Q6ZMY6 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
WDR88Q6ZMY6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.66■□□□□ 0.58
WDR88Q6ZMY6 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
WDR88Q6ZMY6 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
WDR88Q6ZMY6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.65■□□□□ 0.58
WDR88Q6ZMY6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.65■□□□□ 0.58
WDR88Q6ZMY6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
WDR88Q6ZMY6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
WDR88Q6ZMY6 AC091799.1-201ENST00000422823 811 ntBASIC18.65■□□□□ 0.58
WDR88Q6ZMY6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.65■□□□□ 0.58
WDR88Q6ZMY6 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.65■□□□□ 0.58
WDR88Q6ZMY6 AC019069.1-201ENST00000610008 1333 ntBASIC18.65■□□□□ 0.58
WDR88Q6ZMY6 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
WDR88Q6ZMY6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.65■□□□□ 0.58
WDR88Q6ZMY6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
WDR88Q6ZMY6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
WDR88Q6ZMY6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
WDR88Q6ZMY6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
WDR88Q6ZMY6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.64■□□□□ 0.57
WDR88Q6ZMY6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
WDR88Q6ZMY6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.64■□□□□ 0.57
WDR88Q6ZMY6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
WDR88Q6ZMY6 MIR2861-201ENST00000636310 90 ntBASIC18.64■□□□□ 0.57
WDR88Q6ZMY6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.64■□□□□ 0.57
WDR88Q6ZMY6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
WDR88Q6ZMY6 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
WDR88Q6ZMY6 AC099778.1-201ENST00000568593 1911 ntBASIC18.64■□□□□ 0.57
WDR88Q6ZMY6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.64■□□□□ 0.57
WDR88Q6ZMY6 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
WDR88Q6ZMY6 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.63■□□□□ 0.57
WDR88Q6ZMY6 AC092720.2-201ENST00000602388 1665 ntBASIC18.63■□□□□ 0.57
WDR88Q6ZMY6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.63■□□□□ 0.57
WDR88Q6ZMY6 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.63■□□□□ 0.57
WDR88Q6ZMY6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
WDR88Q6ZMY6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
WDR88Q6ZMY6 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
WDR88Q6ZMY6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
WDR88Q6ZMY6 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.63■□□□□ 0.57
WDR88Q6ZMY6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.63■□□□□ 0.57
WDR88Q6ZMY6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.63■□□□□ 0.57
WDR88Q6ZMY6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.63■□□□□ 0.57
WDR88Q6ZMY6 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
WDR88Q6ZMY6 AC243732.1-201ENST00000612648 864 ntBASIC18.63■□□□□ 0.57
WDR88Q6ZMY6 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
WDR88Q6ZMY6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
WDR88Q6ZMY6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
WDR88Q6ZMY6 AFG3L1P-217ENST00000557444 2447 ntBASIC18.63■□□□□ 0.57
WDR88Q6ZMY6 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
WDR88Q6ZMY6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
WDR88Q6ZMY6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
WDR88Q6ZMY6 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
WDR88Q6ZMY6 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
WDR88Q6ZMY6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
WDR88Q6ZMY6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
WDR88Q6ZMY6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
WDR88Q6ZMY6 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
WDR88Q6ZMY6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
WDR88Q6ZMY6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
WDR88Q6ZMY6 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
WDR88Q6ZMY6 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.62■□□□□ 0.57
WDR88Q6ZMY6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
WDR88Q6ZMY6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
WDR88Q6ZMY6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
WDR88Q6ZMY6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
WDR88Q6ZMY6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
WDR88Q6ZMY6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.62■□□□□ 0.57
WDR88Q6ZMY6 SLC7A5P1-201ENST00000568957 537 ntBASIC18.62■□□□□ 0.57
WDR88Q6ZMY6 UBE2DNL-204ENST00000602536 740 ntBASIC18.62■□□□□ 0.57
WDR88Q6ZMY6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
WDR88Q6ZMY6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
WDR88Q6ZMY6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
WDR88Q6ZMY6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
WDR88Q6ZMY6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
WDR88Q6ZMY6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
WDR88Q6ZMY6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
WDR88Q6ZMY6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
WDR88Q6ZMY6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
WDR88Q6ZMY6 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
WDR88Q6ZMY6 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
WDR88Q6ZMY6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
WDR88Q6ZMY6 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
WDR88Q6ZMY6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
WDR88Q6ZMY6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
WDR88Q6ZMY6 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.61■□□□□ 0.57
WDR88Q6ZMY6 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
WDR88Q6ZMY6 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.61■□□□□ 0.57
WDR88Q6ZMY6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms