Protein–RNA interactions for Protein: Q05787

HRD3, ERAD-associated E3 ubiquitin-protein ligase component HRD3, yeastyeast

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD3Q05787 YML045WYML045W 5268 nt2.86□□□□□ -1.95
HRD3Q05787 YMR050CYMR050C 5268 nt2.86□□□□□ -1.95
HRD3Q05787 YOL103W-BYOL103W-B 5268 nt2.86□□□□□ -1.95
HRD3Q05787 YBR012W-BYBR012W-B 5271 nt2.86□□□□□ -1.95
HRD3Q05787 YOR142W-BYOR142W-B 5268 nt2.86□□□□□ -1.95
HRD3Q05787 YPL257W-BYPL257W-B 5268 nt2.86□□□□□ -1.95
HRD3Q05787 YPR158W-BYPR158W-B 5271 nt2.86□□□□□ -1.95
HRD3Q05787 BUD4YJR092W 4344 nt2.86□□□□□ -1.95
HRD3Q05787 MDV1YJL112W 2145 nt2.86□□□□□ -1.95
HRD3Q05787 CCT7YJL111W 1653 nt2.85□□□□□ -1.95
HRD3Q05787 AYT1YLL063C 1425 nt2.85□□□□□ -1.95
HRD3Q05787 MAK21YDR060W 3078 nt2.85□□□□□ -1.95
HRD3Q05787 YER107W-AYER107W-A 321 nt2.85□□□□□ -1.95
HRD3Q05787 ABM1YJR108W 372 nt2.85□□□□□ -1.95
HRD3Q05787 MRPL50YNR022C 420 nt2.85□□□□□ -1.95
HRD3Q05787 COQ10YOL008W 624 nt2.85□□□□□ -1.95
HRD3Q05787 RPL20BYOR312C 519 nt2.85□□□□□ -1.95
HRD3Q05787 FMP23YBR047W 528 nt2.85□□□□□ -1.95
HRD3Q05787 YPL276WYPL276W 438 nt2.85□□□□□ -1.95
HRD3Q05787 YPR014CYPR014C 330 nt2.85□□□□□ -1.95
HRD3Q05787 YPR016W-AYPR016W-A 261 nt2.85□□□□□ -1.95
HRD3Q05787 TOR1YJR066W 7413 nt2.85□□□□□ -1.95
HRD3Q05787 RAX2YLR084C 3663 nt2.84□□□□□ -1.95
HRD3Q05787 SPP382YLR424W 2127 nt2.84□□□□□ -1.95
HRD3Q05787 DIE2YGR227W 1578 nt2.84□□□□□ -1.95
HRD3Q05787 APC11YDL008W 498 nt2.84□□□□□ -1.95
HRD3Q05787 TSA2YDR453C 591 nt2.84□□□□□ -1.95
HRD3Q05787 NOP19YGR251W 591 nt2.84□□□□□ -1.95
HRD3Q05787 YJR140W-AYJR140W-A 150 nt2.84□□□□□ -1.95
HRD3Q05787 SWM2YNR004W 441 nt2.84□□□□□ -1.95
HRD3Q05787 PEP12YOR036W 867 nt2.84□□□□□ -1.95
HRD3Q05787 YPR039WYPR039W 336 nt2.84□□□□□ -1.95
HRD3Q05787 PDC2YDR081C 2778 nt2.84□□□□□ -1.95
HRD3Q05787 NDT80YHR124W 1884 nt2.84□□□□□ -1.96
HRD3Q05787 MDM32YOR147W 1869 nt2.84□□□□□ -1.96
HRD3Q05787 SIP3YNL257C 3690 nt2.83□□□□□ -1.96
HRD3Q05787 YPP1YGR198W 2454 nt2.83□□□□□ -1.96
HRD3Q05787 MKT1YNL085W 2493 nt2.83□□□□□ -1.96
HRD3Q05787 GYP7YDL234C 2241 nt2.83□□□□□ -1.96
HRD3Q05787 SPO71YDR104C 3738 nt2.83□□□□□ -1.96
HRD3Q05787 YEL018C-AYEL018C-A 534 nt2.83□□□□□ -1.96
HRD3Q05787 PET191YJR034W 327 nt2.83□□□□□ -1.96
HRD3Q05787 URA10YMR271C 684 nt2.83□□□□□ -1.96
HRD3Q05787 RPS7BYNL096C 573 nt2.83□□□□□ -1.96
HRD3Q05787 NSL1YPL233W 651 nt2.83□□□□□ -1.96
HRD3Q05787 snR191snR191 274 nt2.83□□□□□ -1.96
HRD3Q05787 NPR1YNL183C 2373 nt2.83□□□□□ -1.96
HRD3Q05787 DOA4YDR069C 2781 nt2.83□□□□□ -1.96
HRD3Q05787 MED1YPR070W 1701 nt2.82□□□□□ -1.96
HRD3Q05787 ENA5YDR038C 3276 nt2.82□□□□□ -1.96
HRD3Q05787 YDL068WYDL068W 330 nt2.82□□□□□ -1.96
HRD3Q05787 YER066C-AYER066C-A 501 nt2.82□□□□□ -1.96
HRD3Q05787 YHR052W-AYHR052W-A 195 nt2.82□□□□□ -1.96
HRD3Q05787 YHR054W-AYHR054W-A 195 nt2.82□□□□□ -1.96
HRD3Q05787 RPC10YHR143W-A 213 nt2.82□□□□□ -1.96
HRD3Q05787 YKL118WYKL118W 312 nt2.82□□□□□ -1.96
HRD3Q05787 YBL065WYBL065W 345 nt2.82□□□□□ -1.96
HRD3Q05787 TCB2YNL087W 3537 nt2.82□□□□□ -1.96
HRD3Q05787 YSW1YBR148W 1830 nt2.82□□□□□ -1.96
HRD3Q05787 SNQ2YDR011W 4506 nt2.81□□□□□ -1.96
HRD3Q05787 YCR022CYCR022C 345 nt2.81□□□□□ -1.96
HRD3Q05787 MRPL31YKL138C 396 nt2.81□□□□□ -1.96
HRD3Q05787 YKR033CYKR033C 426 nt2.81□□□□□ -1.96
HRD3Q05787 JIP3YLR331C 378 nt2.81□□□□□ -1.96
HRD3Q05787 YHR078WYHR078W 1659 nt2.81□□□□□ -1.96
HRD3Q05787 CDH1YGL003C 1701 nt2.81□□□□□ -1.96
HRD3Q05787 EXO84YBR102C 2262 nt2.81□□□□□ -1.96
HRD3Q05787 TSC11YER093C 4293 nt2.81□□□□□ -1.96
HRD3Q05787 YPL150WYPL150W 2706 nt2.8□□□□□ -1.96
HRD3Q05787 TWF1YGR080W 999 nt2.8□□□□□ -1.96
HRD3Q05787 MAM33YIL070C 801 nt2.8□□□□□ -1.96
HRD3Q05787 YMR031W-AYMR031W-A 327 nt2.8□□□□□ -1.96
HRD3Q05787 LEU3YLR451W 2661 nt2.8□□□□□ -1.96
HRD3Q05787 DIA2YOR080W 2199 nt2.8□□□□□ -1.96
HRD3Q05787 SNX41YDR425W 1878 nt2.79□□□□□ -1.96
HRD3Q05787 TAO3YIL129C 7131 nt2.79□□□□□ -1.96
HRD3Q05787 UBP14YBR058C 2346 nt2.79□□□□□ -1.96
HRD3Q05787 YER076W-AYER076W-A 348 nt2.79□□□□□ -1.96
HRD3Q05787 YER188C-AYER188C-A 300 nt2.79□□□□□ -1.96
HRD3Q05787 VTI1YMR197C 654 nt2.79□□□□□ -1.96
HRD3Q05787 DNA2YHR164C 4569 nt2.79□□□□□ -1.96
HRD3Q05787 ATG13YPR185W 2217 nt2.78□□□□□ -1.96
HRD3Q05787 GCD10YNL062C 1437 nt2.78□□□□□ -1.96
HRD3Q05787 SLH1YGR271W 5904 nt2.78□□□□□ -1.96
HRD3Q05787 YDL152WYDL152W 366 nt2.78□□□□□ -1.96
HRD3Q05787 NHP2YDL208W 471 nt2.78□□□□□ -1.96
HRD3Q05787 YHL037CYHL037C 402 nt2.78□□□□□ -1.96
HRD3Q05787 tW(CCA)G1tW(CCA)G1 72 nt2.78□□□□□ -1.96
HRD3Q05787 YIL054WYIL054W 318 nt2.78□□□□□ -1.96
HRD3Q05787 tW(CCA)G2tW(CCA)G2 72 nt2.78□□□□□ -1.96
HRD3Q05787 tW(CCA)JtW(CCA)J 72 nt2.78□□□□□ -1.96
HRD3Q05787 tW(CCA)KtW(CCA)K 72 nt2.78□□□□□ -1.96
HRD3Q05787 tW(CCA)MtW(CCA)M 72 nt2.78□□□□□ -1.96
HRD3Q05787 tW(CCA)PtW(CCA)P 72 nt2.78□□□□□ -1.96
HRD3Q05787 PHD1YKL043W 1101 nt2.78□□□□□ -1.96
HRD3Q05787 YAF9YNL107W 681 nt2.78□□□□□ -1.96
HRD3Q05787 YBL108WYBL108W 306 nt2.78□□□□□ -1.96
HRD3Q05787 YOR146WYOR146W 306 nt2.78□□□□□ -1.96
HRD3Q05787 YOR231C-AYOR231C-A 201 nt2.78□□□□□ -1.96
HRD3Q05787 MET5YJR137C 4329 nt2.78□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 68.6 ms