Protein–RNA interactions for Protein: Q03308

VPS16, Vacuolar protein sorting-associated protein 16, yeastyeast

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS16Q03308 STE14YDR410C 720 nt3.5□□□□□ -1.85
VPS16Q03308 YKL033W-AYKL033W-A 711 nt3.5□□□□□ -1.85
VPS16Q03308 COX7YMR256C 183 nt3.5□□□□□ -1.85
VPS16Q03308 YBL108WYBL108W 306 nt3.5□□□□□ -1.85
VPS16Q03308 BIL1YOR304C-A 231 nt3.5□□□□□ -1.85
VPS16Q03308 EGD1YPL037C 474 nt3.5□□□□□ -1.85
VPS16Q03308 ITC1YGL133W 3795 nt3.5□□□□□ -1.85
VPS16Q03308 ATG26YLR189C 3597 nt3.5□□□□□ -1.85
VPS16Q03308 AUS1YOR011W 4185 nt3.49□□□□□ -1.85
VPS16Q03308 GLC3YEL011W 2115 nt3.49□□□□□ -1.85
VPS16Q03308 VPS52YDR484W 1926 nt3.49□□□□□ -1.85
VPS16Q03308 ATP15YPL271W 189 nt3.49□□□□□ -1.85
VPS16Q03308 CSR2YPR030W 3366 nt3.49□□□□□ -1.85
VPS16Q03308 PSO2YMR137C 1986 nt3.49□□□□□ -1.85
VPS16Q03308 YER097WYER097W 330 nt3.48□□□□□ -1.85
VPS16Q03308 YLR458WYLR458W 381 nt3.48□□□□□ -1.85
VPS16Q03308 SKT5YBL061C 2091 nt3.48□□□□□ -1.85
VPS16Q03308 SWT1YOR166C 1377 nt3.48□□□□□ -1.85
VPS16Q03308 YJL181WYJL181W 1836 nt3.47□□□□□ -1.85
VPS16Q03308 YDL041WYDL041W 354 nt3.47□□□□□ -1.85
VPS16Q03308 YER039C-AYER039C-A 219 nt3.47□□□□□ -1.85
VPS16Q03308 SUP56tL(CAA)A 82 nt3.47□□□□□ -1.85
VPS16Q03308 SUP53tL(CAA)C 82 nt3.47□□□□□ -1.85
VPS16Q03308 tL(CAA)DtL(CAA)D 82 nt3.47□□□□□ -1.85
VPS16Q03308 tL(CAA)G1tL(CAA)G1 82 nt3.47□□□□□ -1.85
VPS16Q03308 SUP54tL(CAA)G2 82 nt3.47□□□□□ -1.85
VPS16Q03308 tL(CAA)G3tL(CAA)G3 82 nt3.47□□□□□ -1.85
VPS16Q03308 tL(CAA)KtL(CAA)K 82 nt3.47□□□□□ -1.85
VPS16Q03308 tL(CAA)LtL(CAA)L 82 nt3.47□□□□□ -1.85
VPS16Q03308 tL(CAA)MtL(CAA)M 82 nt3.47□□□□□ -1.85
VPS16Q03308 tL(CAA)NtL(CAA)N 82 nt3.47□□□□□ -1.85
VPS16Q03308 RPL30YGL030W 318 nt3.47□□□□□ -1.85
VPS16Q03308 USE1YGL098W 738 nt3.47□□□□□ -1.85
VPS16Q03308 GPI14YJR013W 1212 nt3.47□□□□□ -1.85
VPS16Q03308 RAM2YKL019W 951 nt3.47□□□□□ -1.85
VPS16Q03308 snR76snR76 109 nt3.46□□□□□ -1.86
VPS16Q03308 COX19YLL018C-A 297 nt3.46□□□□□ -1.86
VPS16Q03308 YAR053WYAR053W 297 nt3.46□□□□□ -1.86
VPS16Q03308 RPL9BYNL067W 576 nt3.46□□□□□ -1.86
VPS16Q03308 YOR282WYOR282W 321 nt3.46□□□□□ -1.86
VPS16Q03308 BCH1YMR237W 2175 nt3.46□□□□□ -1.86
VPS16Q03308 ARO1YDR127W 4767 nt3.46□□□□□ -1.86
VPS16Q03308 DRS2YAL026C 4068 nt3.45□□□□□ -1.86
VPS16Q03308 YGR107WYGR107W 450 nt3.45□□□□□ -1.86
VPS16Q03308 TRM7YBR061C 933 nt3.45□□□□□ -1.86
VPS16Q03308 HFD1YMR110C 1599 nt3.45□□□□□ -1.86
VPS16Q03308 RGR1YLR071C 3249 nt3.45□□□□□ -1.86
VPS16Q03308 VTC4YJL012C 2166 nt3.45□□□□□ -1.86
VPS16Q03308 RAD2YGR258C 3096 nt3.44□□□□□ -1.86
VPS16Q03308 AAD16YFL057C 459 nt3.44□□□□□ -1.86
VPS16Q03308 AYR1YIL124W 894 nt3.44□□□□□ -1.86
VPS16Q03308 PAU14YIL176C 363 nt3.44□□□□□ -1.86
VPS16Q03308 MSL1YIR009W 336 nt3.44□□□□□ -1.86
VPS16Q03308 PAU1YJL223C 363 nt3.44□□□□□ -1.86
VPS16Q03308 YAL064W-BYAL064W-B 381 nt3.44□□□□□ -1.86
VPS16Q03308 ATP3YBR039W 936 nt3.44□□□□□ -1.86
VPS16Q03308 YBR197CYBR197C 654 nt3.44□□□□□ -1.86
VPS16Q03308 snR65snR65 100 nt3.43□□□□□ -1.86
VPS16Q03308 PSF1YDR013W 627 nt3.43□□□□□ -1.86
VPS16Q03308 TMA22YJR014W 597 nt3.43□□□□□ -1.86
VPS16Q03308 CCW14YLR390W-A 717 nt3.43□□□□□ -1.86
VPS16Q03308 RPS18BYML026C 441 nt3.43□□□□□ -1.86
VPS16Q03308 CHO2YGR157W 2610 nt3.43□□□□□ -1.86
VPS16Q03308 YHR078WYHR078W 1659 nt3.43□□□□□ -1.86
VPS16Q03308 NET1YJL076W 3570 nt3.42□□□□□ -1.86
VPS16Q03308 YDR102CYDR102C 333 nt3.42□□□□□ -1.86
VPS16Q03308 TIM18YOR297C 579 nt3.42□□□□□ -1.86
VPS16Q03308 IRC10YOL015W 1761 nt3.42□□□□□ -1.86
VPS16Q03308 NAB3YPL190C 2409 nt3.41□□□□□ -1.86
VPS16Q03308 snR79snR79 84 nt3.41□□□□□ -1.86
VPS16Q03308 YER023C-AYER023C-A 213 nt3.41□□□□□ -1.86
VPS16Q03308 DNL4YOR005C 2835 nt3.4□□□□□ -1.86
VPS16Q03308 RPL40AYIL148W 387 nt3.4□□□□□ -1.87
VPS16Q03308 RGM1YMR182C 636 nt3.4□□□□□ -1.87
VPS16Q03308 RPL25YOL127W 429 nt3.4□□□□□ -1.87
VPS16Q03308 ASG1YIL130W 2895 nt3.4□□□□□ -1.87
VPS16Q03308 TLC1TLC1 1301 nt3.4□□□□□ -1.87
VPS16Q03308 RRP5YMR229C 5190 nt3.4□□□□□ -1.87
VPS16Q03308 PFK26YIL107C 2484 nt3.39□□□□□ -1.87
VPS16Q03308 NAN1YPL126W 2691 nt3.39□□□□□ -1.87
VPS16Q03308 DBP7YKR024C 2229 nt3.39□□□□□ -1.87
VPS16Q03308 DOA4YDR069C 2781 nt3.39□□□□□ -1.87
VPS16Q03308 VPS41YDR080W 2979 nt3.39□□□□□ -1.87
VPS16Q03308 YLR031WYLR031W 561 nt3.39□□□□□ -1.87
VPS16Q03308 YNL010WYNL010W 726 nt3.39□□□□□ -1.87
VPS16Q03308 ROX1YPR065W 1107 nt3.39□□□□□ -1.87
VPS16Q03308 YFL032WYFL032W 321 nt3.38□□□□□ -1.87
VPS16Q03308 YJL202CYJL202C 348 nt3.38□□□□□ -1.87
VPS16Q03308 YPL182CYPL182C 384 nt3.38□□□□□ -1.87
VPS16Q03308 ORC1YML065W 2745 nt3.37□□□□□ -1.87
VPS16Q03308 ROG1YGL144C 2058 nt3.37□□□□□ -1.87
VPS16Q03308 MZM1YDR493W 372 nt3.37□□□□□ -1.87
VPS16Q03308 tW(UCA)QtW(UCA)Q 74 nt3.37□□□□□ -1.87
VPS16Q03308 UTP30YKR060W 825 nt3.37□□□□□ -1.87
VPS16Q03308 YAR029WYAR029W 225 nt3.37□□□□□ -1.87
VPS16Q03308 RPS28BYLR264W 204 nt3.37□□□□□ -1.87
VPS16Q03308 PUF6YDR496C 1971 nt3.37□□□□□ -1.87
VPS16Q03308 LRG1YDL240W 3054 nt3.37□□□□□ -1.87
VPS16Q03308 YMR317WYMR317W 3423 nt3.37□□□□□ -1.87
VPS16Q03308 CDC24YAL041W 2565 nt3.36□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 58.6 ms