Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 RPS7BYNL096C 573 nt3.21□□□□□ -1.9
SSL2Q00578 YPL080CYPL080C 327 nt3.21□□□□□ -1.9
SSL2Q00578 SPC72YAL047C 1869 nt3.21□□□□□ -1.9
SSL2Q00578 SRB4YER022W 2064 nt3.21□□□□□ -1.9
SSL2Q00578 DIA2YOR080W 2199 nt3.21□□□□□ -1.9
SSL2Q00578 TSC11YER093C 4293 nt3.21□□□□□ -1.9
SSL2Q00578 YIL169CYIL169C 2988 nt3.2□□□□□ -1.9
SSL2Q00578 SSN8YNL025C 972 nt3.2□□□□□ -1.9
SSL2Q00578 snR36snR36 182 nt3.2□□□□□ -1.9
SSL2Q00578 SWD3YBR175W 948 nt3.2□□□□□ -1.9
SSL2Q00578 DBP7YKR024C 2229 nt3.19□□□□□ -1.9
SSL2Q00578 RPB9YGL070C 369 nt3.19□□□□□ -1.9
SSL2Q00578 SHE2YKL130C 741 nt3.19□□□□□ -1.9
SSL2Q00578 JLP2YMR132C 627 nt3.19□□□□□ -1.9
SSL2Q00578 RPL23AYBL087C 414 nt3.19□□□□□ -1.9
SSL2Q00578 BIL1YOR304C-A 231 nt3.19□□□□□ -1.9
SSL2Q00578 PSK1YAL017W 4071 nt3.19□□□□□ -1.9
SSL2Q00578 ATP17YDR377W 306 nt3.18□□□□□ -1.9
SSL2Q00578 RPL29YFR032C-A 180 nt3.18□□□□□ -1.9
SSL2Q00578 YJL202CYJL202C 348 nt3.18□□□□□ -1.9
SSL2Q00578 YLR031WYLR031W 561 nt3.18□□□□□ -1.9
SSL2Q00578 YNL337WYNL337W 255 nt3.18□□□□□ -1.9
SSL2Q00578 YKL100CYKL100C 1764 nt3.17□□□□□ -1.9
SSL2Q00578 NOP19YGR251W 591 nt3.17□□□□□ -1.9
SSL2Q00578 RPS21BYJL136C 264 nt3.17□□□□□ -1.9
SSL2Q00578 RPL39YJL189W 156 nt3.17□□□□□ -1.9
SSL2Q00578 JIP3YLR331C 378 nt3.17□□□□□ -1.9
SSL2Q00578 RPB11YOL005C 363 nt3.17□□□□□ -1.9
SSL2Q00578 YPL238CYPL238C 390 nt3.17□□□□□ -1.9
SSL2Q00578 SLM6YBR266C 453 nt3.17□□□□□ -1.9
SSL2Q00578 YOR296WYOR296W 3870 nt3.17□□□□□ -1.9
SSL2Q00578 ALY1YKR021W 2748 nt3.16□□□□□ -1.9
SSL2Q00578 MES1YGR264C 2256 nt3.16□□□□□ -1.9
SSL2Q00578 RAD6YGL058W 519 nt3.16□□□□□ -1.9
SSL2Q00578 RPC10YHR143W-A 213 nt3.16□□□□□ -1.9
SSL2Q00578 CAJ1YER048C 1176 nt3.15□□□□□ -1.91
SSL2Q00578 SRL3YKR091W 741 nt3.15□□□□□ -1.91
SSL2Q00578 RPL6AYML073C 531 nt3.15□□□□□ -1.91
SSL2Q00578 YOP1YPR028W 543 nt3.15□□□□□ -1.91
SSL2Q00578 DPB11YJL090C 2295 nt3.15□□□□□ -1.91
SSL2Q00578 PDC2YDR081C 2778 nt3.15□□□□□ -1.91
SSL2Q00578 MAK21YDR060W 3078 nt3.15□□□□□ -1.91
SSL2Q00578 JJJ2YJL162C 1752 nt3.15□□□□□ -1.91
SSL2Q00578 CCT7YJL111W 1653 nt3.14□□□□□ -1.91
SSL2Q00578 KAP104YBR017C 2757 nt3.14□□□□□ -1.91
SSL2Q00578 KIN82YCR091W 2163 nt3.14□□□□□ -1.91
SSL2Q00578 RGC1YPR115W 3252 nt3.14□□□□□ -1.91
SSL2Q00578 MSL1YIR009W 336 nt3.14□□□□□ -1.91
SSL2Q00578 YJR023CYJR023C 402 nt3.14□□□□□ -1.91
SSL2Q00578 SMA2YML066C 1110 nt3.14□□□□□ -1.91
SSL2Q00578 JIP5YPR169W 1479 nt3.14□□□□□ -1.91
SSL2Q00578 MET5YJR137C 4329 nt3.14□□□□□ -1.91
SSL2Q00578 NDD1YOR372C 1665 nt3.14□□□□□ -1.91
SSL2Q00578 NDT80YHR124W 1884 nt3.13□□□□□ -1.91
SSL2Q00578 YME2YMR302C 2553 nt3.13□□□□□ -1.91
SSL2Q00578 ROM1YGR070W 3468 nt3.13□□□□□ -1.91
SSL2Q00578 VAS1YGR094W 3315 nt3.13□□□□□ -1.91
SSL2Q00578 HMF1YER057C 390 nt3.13□□□□□ -1.91
SSL2Q00578 YER066C-AYER066C-A 501 nt3.13□□□□□ -1.91
SSL2Q00578 YER076W-AYER076W-A 348 nt3.13□□□□□ -1.91
SSL2Q00578 PRE8YML092C 753 nt3.13□□□□□ -1.91
SSL2Q00578 YLR001CYLR001C 2589 nt3.13□□□□□ -1.91
SSL2Q00578 ECM21YBL101C 3354 nt3.13□□□□□ -1.91
SSL2Q00578 MDM32YOR147W 1869 nt3.13□□□□□ -1.91
SSL2Q00578 SLP1YOR154W 1764 nt3.12□□□□□ -1.91
SSL2Q00578 AXL1YPR122W 3627 nt3.12□□□□□ -1.91
SSL2Q00578 STE6YKL209C 3873 nt3.12□□□□□ -1.91
SSL2Q00578 SNX41YDR425W 1878 nt3.12□□□□□ -1.91
SSL2Q00578 STN1YDR082W 1485 nt3.12□□□□□ -1.91
SSL2Q00578 RMT2YDR465C 1239 nt3.12□□□□□ -1.91
SSL2Q00578 IRC4YDR540C 540 nt3.12□□□□□ -1.91
SSL2Q00578 ERG28YER044C 447 nt3.12□□□□□ -1.91
SSL2Q00578 YER188C-AYER188C-A 300 nt3.12□□□□□ -1.91
SSL2Q00578 BAT1YHR208W 1182 nt3.12□□□□□ -1.91
SSL2Q00578 UTP30YKR060W 825 nt3.12□□□□□ -1.91
SSL2Q00578 ISF1YMR081C 1017 nt3.12□□□□□ -1.91
SSL2Q00578 PGA1YNL158W 597 nt3.12□□□□□ -1.91
SSL2Q00578 EGD1YPL037C 474 nt3.12□□□□□ -1.91
SSL2Q00578 YPL152W-AYPL152W-A 99 nt3.12□□□□□ -1.91
SSL2Q00578 OSH6YKR003W 1347 nt3.12□□□□□ -1.91
SSL2Q00578 NMA111YNL123W 2994 nt3.12□□□□□ -1.91
SSL2Q00578 SPO14YKR031C 5052 nt3.12□□□□□ -1.91
SSL2Q00578 YDR183C-AYDR183C-A 258 nt3.11□□□□□ -1.91
SSL2Q00578 RPL37AYLR185W 267 nt3.11□□□□□ -1.91
SSL2Q00578 RSE1YML049C 4086 nt3.11□□□□□ -1.91
SSL2Q00578 ARK1YNL020C 1917 nt3.11□□□□□ -1.91
SSL2Q00578 GYP7YDL234C 2241 nt3.11□□□□□ -1.91
SSL2Q00578 INP52YNL106C 3552 nt3.1□□□□□ -1.91
SSL2Q00578 tF(GAA)DtF(GAA)D 73 nt3.1□□□□□ -1.91
SSL2Q00578 tF(GAA)NtF(GAA)N 73 nt3.1□□□□□ -1.91
SSL2Q00578 YER107W-AYER107W-A 321 nt3.1□□□□□ -1.91
SSL2Q00578 YFR056CYFR056C 369 nt3.1□□□□□ -1.91
SSL2Q00578 tM(CAU)Q1tM(CAU)Q1 76 nt3.1□□□□□ -1.91
SSL2Q00578 PAU14YIL176C 363 nt3.1□□□□□ -1.91
SSL2Q00578 PAU1YJL223C 363 nt3.1□□□□□ -1.91
SSL2Q00578 YJR140W-AYJR140W-A 150 nt3.1□□□□□ -1.91
SSL2Q00578 SNF12YNR023W 1701 nt3.1□□□□□ -1.91
SSL2Q00578 SIN3YOL004W 4611 nt3.1□□□□□ -1.91
SSL2Q00578 SEC7YDR170C 6030 nt3.09□□□□□ -1.91
SSL2Q00578 VHR2YER064C 1518 nt3.09□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 16.9 ms