Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 YOR331CYOR331C 558 nt2.61□□□□□ -1.99
SUB1P54000 RPB5YBR154C 648 nt2.61□□□□□ -1.99
SUB1P54000 SWR1YDR334W 4545 nt2.6□□□□□ -1.99
SUB1P54000 PEX4YGR133W 552 nt2.6□□□□□ -1.99
SUB1P54000 BET3YKR068C 582 nt2.6□□□□□ -1.99
SUB1P54000 YMR254CYMR254C 309 nt2.6□□□□□ -1.99
SUB1P54000 YMR316C-AYMR316C-A 312 nt2.6□□□□□ -1.99
SUB1P54000 RPB11YOL005C 363 nt2.6□□□□□ -1.99
SUB1P54000 YOR055WYOR055W 435 nt2.6□□□□□ -1.99
SUB1P54000 SPF1YEL031W 3648 nt2.6□□□□□ -1.99
SUB1P54000 USO1YDL058W 5373 nt2.6□□□□□ -1.99
SUB1P54000 MDM32YOR147W 1869 nt2.59□□□□□ -1.99
SUB1P54000 YDL187CYDL187C 330 nt2.59□□□□□ -1.99
SUB1P54000 IRC4YDR540C 540 nt2.59□□□□□ -1.99
SUB1P54000 SCEIQ0160 708 nt2.59□□□□□ -1.99
SUB1P54000 YJL127C-BYJL127C-B 159 nt2.59□□□□□ -1.99
SUB1P54000 YOR050CYOR050C 348 nt2.59□□□□□ -1.99
SUB1P54000 JID1YPR061C 906 nt2.59□□□□□ -1.99
SUB1P54000 SVL3YPL032C 2478 nt2.59□□□□□ -2
SUB1P54000 CFT2YLR115W 2580 nt2.58□□□□□ -2
SUB1P54000 SSD1YDR293C 3753 nt2.58□□□□□ -2
SUB1P54000 ELG1YOR144C 2376 nt2.58□□□□□ -2
SUB1P54000 YER175W-AYER175W-A 165 nt2.58□□□□□ -2
SUB1P54000 HOP2YGL033W 657 nt2.58□□□□□ -2
SUB1P54000 RPI1YIL119C 1224 nt2.58□□□□□ -2
SUB1P54000 SAS2YMR127C 1017 nt2.58□□□□□ -2
SUB1P54000 ROX1YPR065W 1107 nt2.58□□□□□ -2
SUB1P54000 YBR209WYBR209W 318 nt2.58□□□□□ -2
SUB1P54000 BUB1YGR188C 3066 nt2.58□□□□□ -2
SUB1P54000 CDC60YPL160W 3273 nt2.58□□□□□ -2
SUB1P54000 CAT2YML042W 2013 nt2.58□□□□□ -2
SUB1P54000 CRD1YDL142C 852 nt2.57□□□□□ -2
SUB1P54000 YDR193WYDR193W 399 nt2.57□□□□□ -2
SUB1P54000 CHZ1YER030W 462 nt2.57□□□□□ -2
SUB1P54000 VMA21YGR105W 234 nt2.57□□□□□ -2
SUB1P54000 LRP1YHR081W 555 nt2.57□□□□□ -2
SUB1P54000 URA10YMR271C 684 nt2.57□□□□□ -2
SUB1P54000 BI4Q0120 1917 nt2.57□□□□□ -2
SUB1P54000 YOL098CYOL098C 3114 nt2.57□□□□□ -2
SUB1P54000 REF2YDR195W 1602 nt2.57□□□□□ -2
SUB1P54000 CRM1YGR218W 3255 nt2.56□□□□□ -2
SUB1P54000 PEA2YER149C 1263 nt2.56□□□□□ -2
SUB1P54000 YPS5YGL259W 498 nt2.56□□□□□ -2
SUB1P54000 RCN1YKL159C 636 nt2.56□□□□□ -2
SUB1P54000 TEN1YLR010C 483 nt2.56□□□□□ -2
SUB1P54000 DBP10YDL031W 2988 nt2.56□□□□□ -2
SUB1P54000 tF(GAA)DtF(GAA)D 73 nt2.55□□□□□ -2
SUB1P54000 tF(GAA)NtF(GAA)N 73 nt2.55□□□□□ -2
SUB1P54000 RPL37BYDR500C 267 nt2.55□□□□□ -2
SUB1P54000 CAJ1YER048C 1176 nt2.55□□□□□ -2
SUB1P54000 YHR078WYHR078W 1659 nt2.55□□□□□ -2
SUB1P54000 YKL033W-AYKL033W-A 711 nt2.55□□□□□ -2
SUB1P54000 YKL066WYKL066W 444 nt2.55□□□□□ -2
SUB1P54000 YKR051WYKR051W 1257 nt2.55□□□□□ -2
SUB1P54000 YLR154W-EYLR154W-E 204 nt2.55□□□□□ -2
SUB1P54000 YMR052C-AYMR052C-A 366 nt2.55□□□□□ -2
SUB1P54000 YPR096CYPR096C 303 nt2.55□□□□□ -2
SUB1P54000 IRC8YJL051W 2469 nt2.54□□□□□ -2
SUB1P54000 APM3YBR288C 1452 nt2.54□□□□□ -2
SUB1P54000 SSY1YDR160W 2559 nt2.54□□□□□ -2
SUB1P54000 SYH1YPL105C 2550 nt2.54□□□□□ -2
SUB1P54000 AIM18YHR198C 966 nt2.54□□□□□ -2
SUB1P54000 CSI1YMR025W 888 nt2.54□□□□□ -2
SUB1P54000 VMA9YCL005W-A 222 nt2.54□□□□□ -2
SUB1P54000 UBP1YDL122W 2430 nt2.54□□□□□ -2
SUB1P54000 YDR341CYDR341C 1824 nt2.54□□□□□ -2
SUB1P54000 TDA9YML081W 3756 nt2.53□□□□□ -2
SUB1P54000 MZM1YDR493W 372 nt2.53□□□□□ -2
SUB1P54000 YGL015CYGL015C 393 nt2.53□□□□□ -2
SUB1P54000 SLX9YGR081C 633 nt2.53□□□□□ -2
SUB1P54000 VOA1YGR106C 798 nt2.53□□□□□ -2
SUB1P54000 YGR283CYGR283C 1026 nt2.53□□□□□ -2
SUB1P54000 RRF1YHR038W 693 nt2.53□□□□□ -2
SUB1P54000 BUD19YJL188C 309 nt2.53□□□□□ -2
SUB1P54000 YML084WYML084W 309 nt2.53□□□□□ -2
SUB1P54000 ATP15YPL271W 189 nt2.53□□□□□ -2
SUB1P54000 STE11YLR362W 2154 nt2.53□□□□□ -2
SUB1P54000 MGM1YOR211C 2646 nt2.53□□□□□ -2.01
SUB1P54000 VPS35YJL154C 2835 nt2.52□□□□□ -2.01
SUB1P54000 AFR1YDR085C 1863 nt2.52□□□□□ -2.01
SUB1P54000 TIM10YHR005C-A 282 nt2.52□□□□□ -2.01
SUB1P54000 AIM19YIL087C 474 nt2.52□□□□□ -2.01
SUB1P54000 YAP5YIR018W 738 nt2.52□□□□□ -2.01
SUB1P54000 YIR020CYIR020C 303 nt2.52□□□□□ -2.01
SUB1P54000 YKL023C-AYKL023C-A 228 nt2.52□□□□□ -2.01
SUB1P54000 YNL010WYNL010W 726 nt2.52□□□□□ -2.01
SUB1P54000 PEX17YNL214W 600 nt2.52□□□□□ -2.01
SUB1P54000 PHO80YOL001W 882 nt2.52□□□□□ -2.01
SUB1P54000 YPR172WYPR172W 603 nt2.52□□□□□ -2.01
SUB1P54000 RLP24YLR009W 600 nt2.51□□□□□ -2.01
SUB1P54000 RPS7BYNL096C 573 nt2.51□□□□□ -2.01
SUB1P54000 YOR152CYOR152C 771 nt2.51□□□□□ -2.01
SUB1P54000 SNX41YDR425W 1878 nt2.51□□□□□ -2.01
SUB1P54000 YCR087C-AYCR087C-A 462 nt2.5□□□□□ -2.01
SUB1P54000 RPA34YJL148W 702 nt2.5□□□□□ -2.01
SUB1P54000 AIM32YML050W 936 nt2.5□□□□□ -2.01
SUB1P54000 HER1YOR227W 3741 nt2.49□□□□□ -2.01
SUB1P54000 PTP3YER075C 2787 nt2.49□□□□□ -2.01
SUB1P54000 YIL030W-AYIL030W-A 339 nt2.49□□□□□ -2.01
SUB1P54000 YLR031WYLR031W 561 nt2.49□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 55.8 ms