Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 CRD1YDL142C 852 nt0.8□□□□□ -2.28
TY1B-JR1P47098 VOA1YGR106C 798 nt0.8□□□□□ -2.28
TY1B-JR1P47098 RPS18BYML026C 441 nt0.8□□□□□ -2.28
TY1B-JR1P47098 CTK3YML112W 891 nt0.8□□□□□ -2.28
TY1B-JR1P47098 YMR052C-AYMR052C-A 366 nt0.8□□□□□ -2.28
TY1B-JR1P47098 COS7YDL248W 1152 nt0.8□□□□□ -2.28
TY1B-JR1P47098 YMR031W-AYMR031W-A 327 nt0.8□□□□□ -2.28
TY1B-JR1P47098 DYN3YMR299C 939 nt0.8□□□□□ -2.28
TY1B-JR1P47098 HHT2YNL031C 411 nt0.8□□□□□ -2.28
TY1B-JR1P47098 DXO1YDR370C 1329 nt0.79□□□□□ -2.28
TY1B-JR1P47098 MMF1YIL051C 438 nt0.79□□□□□ -2.28
TY1B-JR1P47098 YPL238CYPL238C 390 nt0.79□□□□□ -2.28
TY1B-JR1P47098 PIN3YPR154W 648 nt0.79□□□□□ -2.28
TY1B-JR1P47098 RNP1YLL046C 750 nt0.78□□□□□ -2.28
TY1B-JR1P47098 AIM36YMR157C 768 nt0.78□□□□□ -2.28
TY1B-JR1P47098 CAF20YOR276W 486 nt0.78□□□□□ -2.28
TY1B-JR1P47098 MSS4YDR208W 2340 nt0.78□□□□□ -2.28
TY1B-JR1P47098 SHS1YDL225W 1656 nt0.78□□□□□ -2.29
TY1B-JR1P47098 HUL5YGL141W 2733 nt0.78□□□□□ -2.29
TY1B-JR1P47098 UBC9YDL064W 474 nt0.78□□□□□ -2.29
TY1B-JR1P47098 YER078W-AYER078W-A 165 nt0.78□□□□□ -2.29
TY1B-JR1P47098 YPL035CYPL035C 348 nt0.78□□□□□ -2.29
TY1B-JR1P47098 MFB1YDR219C 1398 nt0.77□□□□□ -2.29
TY1B-JR1P47098 NBL1YHR199C-A 222 nt0.77□□□□□ -2.29
TY1B-JR1P47098 MRP2YPR166C 348 nt0.77□□□□□ -2.29
TY1B-JR1P47098 MED8YBR193C 672 nt0.77□□□□□ -2.29
TY1B-JR1P47098 EST2YLR318W 2655 nt0.76□□□□□ -2.29
TY1B-JR1P47098 RRP6YOR001W 2202 nt0.76□□□□□ -2.29
TY1B-JR1P47098 PBP4YDL053C 558 nt0.75□□□□□ -2.29
TY1B-JR1P47098 CCL1YPR025C 1182 nt0.75□□□□□ -2.29
TY1B-JR1P47098 TRM12YML005W 1389 nt0.75□□□□□ -2.29
TY1B-JR1P47098 YDR355CYDR355C 303 nt0.75□□□□□ -2.29
TY1B-JR1P47098 PEX27YOR193W 1131 nt0.75□□□□□ -2.29
TY1B-JR1P47098 PRK1YIL095W 2433 nt0.74□□□□□ -2.29
TY1B-JR1P47098 SNC1YAL030W 354 nt0.74□□□□□ -2.29
TY1B-JR1P47098 YLR379WYLR379W 375 nt0.74□□□□□ -2.29
TY1B-JR1P47098 APC2YLR127C 2562 nt0.74□□□□□ -2.29
TY1B-JR1P47098 YNR066CYNR066C 1311 nt0.74□□□□□ -2.29
TY1B-JR1P47098 RTG3YBL103C 1461 nt0.74□□□□□ -2.29
TY1B-JR1P47098 MON1YGL124C 1935 nt0.74□□□□□ -2.29
TY1B-JR1P47098 MSS2YDL107W 1056 nt0.73□□□□□ -2.29
TY1B-JR1P47098 YEL028WYEL028W 462 nt0.73□□□□□ -2.29
TY1B-JR1P47098 GLC7YER133W 939 nt0.73□□□□□ -2.29
TY1B-JR1P47098 BAG7YOR134W 1230 nt0.73□□□□□ -2.29
TY1B-JR1P47098 ESA1YOR244W 1338 nt0.73□□□□□ -2.29
TY1B-JR1P47098 ATG5YPL149W 885 nt0.73□□□□□ -2.29
TY1B-JR1P47098 FUS1YCL027W 1539 nt0.73□□□□□ -2.29
TY1B-JR1P47098 snR76snR76 109 nt0.73□□□□□ -2.29
TY1B-JR1P47098 VTI1YMR197C 654 nt0.73□□□□□ -2.29
TY1B-JR1P47098 YRO2YBR054W 1035 nt0.73□□□□□ -2.29
TY1B-JR1P47098 LST4YKL176C 2487 nt0.73□□□□□ -2.29
TY1B-JR1P47098 PPN1YDR452W 2025 nt0.72□□□□□ -2.29
TY1B-JR1P47098 BTT1YDR252W 450 nt0.72□□□□□ -2.29
TY1B-JR1P47098 RPL37BYDR500C 267 nt0.72□□□□□ -2.29
TY1B-JR1P47098 SRL1YOR247W 633 nt0.72□□□□□ -2.29
TY1B-JR1P47098 YMR31YFR049W 372 nt0.71□□□□□ -2.3
TY1B-JR1P47098 YBL029WYBL029W 1131 nt0.71□□□□□ -2.3
TY1B-JR1P47098 FMN1YDR236C 657 nt0.7□□□□□ -2.3
TY1B-JR1P47098 YER107W-AYER107W-A 321 nt0.7□□□□□ -2.3
TY1B-JR1P47098 YLR149CYLR149C 2193 nt0.7□□□□□ -2.3
TY1B-JR1P47098 ATP16YDL004W 483 nt0.7□□□□□ -2.3
TY1B-JR1P47098 CDC50YCR094W 1176 nt0.69□□□□□ -2.3
TY1B-JR1P47098 CKA1YIL035C 1119 nt0.69□□□□□ -2.3
TY1B-JR1P47098 YJL211CYJL211C 444 nt0.69□□□□□ -2.3
TY1B-JR1P47098 YBR032WYBR032W 303 nt0.69□□□□□ -2.3
TY1B-JR1P47098 HSE1YHL002W 1359 nt0.69□□□□□ -2.3
TY1B-JR1P47098 POL4YCR014C 1749 nt0.68□□□□□ -2.3
TY1B-JR1P47098 YDR018CYDR018C 1191 nt0.68□□□□□ -2.3
TY1B-JR1P47098 SPO74YGL170C 1242 nt0.68□□□□□ -2.3
TY1B-JR1P47098 CHC1YGL206C 4962 nt0.68□□□□□ -2.3
TY1B-JR1P47098 KAP122YGL016W 3246 nt0.68□□□□□ -2.3
TY1B-JR1P47098 RGI2YIL057C 495 nt0.68□□□□□ -2.3
TY1B-JR1P47098 YKL177WYKL177W 339 nt0.68□□□□□ -2.3
TY1B-JR1P47098 SRN2YLR119W 642 nt0.68□□□□□ -2.3
TY1B-JR1P47098 YLR169WYLR169W 354 nt0.68□□□□□ -2.3
TY1B-JR1P47098 CPR3YML078W 549 nt0.68□□□□□ -2.3
TY1B-JR1P47098 ASI3YNL008C 2031 nt0.67□□□□□ -2.3
TY1B-JR1P47098 ACB1YGR037C 264 nt0.67□□□□□ -2.3
TY1B-JR1P47098 YLR307C-AYLR307C-A 264 nt0.67□□□□□ -2.3
TY1B-JR1P47098 AIM6YDL237W 1173 nt0.66□□□□□ -2.3
TY1B-JR1P47098 UBC5YDR059C 447 nt0.66□□□□□ -2.3
TY1B-JR1P47098 YGR273CYGR273C 525 nt0.66□□□□□ -2.3
TY1B-JR1P47098 YLR444CYLR444C 303 nt0.66□□□□□ -2.3
TY1B-JR1P47098 YNL144W-AYNL144W-A 84 nt0.66□□□□□ -2.3
TY1B-JR1P47098 snR14snR14 160 nt0.66□□□□□ -2.3
TY1B-JR1P47098 MNE1YOR350C 1992 nt0.66□□□□□ -2.3
TY1B-JR1P47098 PAF1YBR279W 1338 nt0.66□□□□□ -2.3
TY1B-JR1P47098 YDL026WYDL026W 312 nt0.65□□□□□ -2.3
TY1B-JR1P47098 RNH202YDR279W 1053 nt0.65□□□□□ -2.3
TY1B-JR1P47098 ERV14YGL054C 417 nt0.65□□□□□ -2.3
TY1B-JR1P47098 AEP3YPL005W 1821 nt0.65□□□□□ -2.3
TY1B-JR1P47098 SHR3YDL212W 633 nt0.65□□□□□ -2.31
TY1B-JR1P47098 CIC1YHR052W 1131 nt0.65□□□□□ -2.31
TY1B-JR1P47098 YLR400WYLR400W 474 nt0.65□□□□□ -2.31
TY1B-JR1P47098 HMI1YOL095C 2121 nt0.65□□□□□ -2.31
TY1B-JR1P47098 RLM1YPL089C 2031 nt0.64□□□□□ -2.31
TY1B-JR1P47098 SHU2YDR078C 672 nt0.64□□□□□ -2.31
TY1B-JR1P47098 PUS9YDL036C 1389 nt0.63□□□□□ -2.31
TY1B-JR1P47098 YMR272W-AYMR272W-A 114 nt0.63□□□□□ -2.31
TY1B-JR1P47098 MPD1YOR288C 957 nt0.63□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 50.7 ms