Protein–RNA interactions for Protein: P40073

SHO1, High osmolarity signaling protein SHO1, yeastyeast

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHO1P40073 TRM2YKR056W 1920 nt2.42□□□□□ -2.02
SHO1P40073 FIR1YER032W 2631 nt2.41□□□□□ -2.02
SHO1P40073 COG3YER157W 2406 nt2.41□□□□□ -2.02
SHO1P40073 YGR067CYGR067C 2415 nt2.41□□□□□ -2.02
SHO1P40073 NPR1YNL183C 2373 nt2.41□□□□□ -2.02
SHO1P40073 IRC4YDR540C 540 nt2.41□□□□□ -2.02
SHO1P40073 YJR023CYJR023C 402 nt2.41□□□□□ -2.02
SHO1P40073 JIP3YLR331C 378 nt2.41□□□□□ -2.02
SHO1P40073 CDC33YOL139C 642 nt2.41□□□□□ -2.02
SHO1P40073 YBT1YLL048C 4986 nt2.41□□□□□ -2.02
SHO1P40073 RNH70YGR276C 1662 nt2.41□□□□□ -2.02
SHO1P40073 GEA1YJR031C 4227 nt2.4□□□□□ -2.02
SHO1P40073 CAF120YNL278W 3183 nt2.4□□□□□ -2.03
SHO1P40073 snR70snR70 164 nt2.4□□□□□ -2.03
SHO1P40073 YEL018C-AYEL018C-A 534 nt2.4□□□□□ -2.03
SHO1P40073 tW(CCA)G1tW(CCA)G1 72 nt2.4□□□□□ -2.03
SHO1P40073 tW(CCA)G2tW(CCA)G2 72 nt2.4□□□□□ -2.03
SHO1P40073 tW(CCA)JtW(CCA)J 72 nt2.4□□□□□ -2.03
SHO1P40073 tW(CCA)KtW(CCA)K 72 nt2.4□□□□□ -2.03
SHO1P40073 tW(CCA)MtW(CCA)M 72 nt2.4□□□□□ -2.03
SHO1P40073 tW(CCA)PtW(CCA)P 72 nt2.4□□□□□ -2.03
SHO1P40073 TPM2YIL138C 486 nt2.4□□□□□ -2.03
SHO1P40073 PEP8YJL053W 1140 nt2.4□□□□□ -2.03
SHO1P40073 YBR032WYBR032W 303 nt2.4□□□□□ -2.03
SHO1P40073 FUS1YCL027W 1539 nt2.4□□□□□ -2.03
SHO1P40073 ROY1YMR258C 1662 nt2.4□□□□□ -2.03
SHO1P40073 UTP14YML093W 2700 nt2.4□□□□□ -2.03
SHO1P40073 MDM32YOR147W 1869 nt2.39□□□□□ -2.03
SHO1P40073 APC2YLR127C 2562 nt2.39□□□□□ -2.03
SHO1P40073 RPS17BYDR447C 411 nt2.39□□□□□ -2.03
SHO1P40073 GLC7YER133W 939 nt2.39□□□□□ -2.03
SHO1P40073 RPL37AYLR185W 267 nt2.39□□□□□ -2.03
SHO1P40073 SIP18YMR175W 240 nt2.39□□□□□ -2.03
SHO1P40073 DGK1YOR311C 873 nt2.39□□□□□ -2.03
SHO1P40073 YNL034WYNL034W 1839 nt2.39□□□□□ -2.03
SHO1P40073 PSD2YGR170W 3417 nt2.38□□□□□ -2.03
SHO1P40073 SWF1YDR126W 1011 nt2.38□□□□□ -2.03
SHO1P40073 YDR194W-AYDR194W-A 153 nt2.38□□□□□ -2.03
SHO1P40073 PNC1YGL037C 651 nt2.38□□□□□ -2.03
SHO1P40073 YGL165CYGL165C 579 nt2.38□□□□□ -2.03
SHO1P40073 RRF1YHR038W 693 nt2.38□□□□□ -2.03
SHO1P40073 YML084WYML084W 309 nt2.38□□□□□ -2.03
SHO1P40073 URA10YMR271C 684 nt2.38□□□□□ -2.03
SHO1P40073 LCL1YPL056C 306 nt2.38□□□□□ -2.03
SHO1P40073 SPB1YCL054W 2526 nt2.38□□□□□ -2.03
SHO1P40073 YPL150WYPL150W 2706 nt2.38□□□□□ -2.03
SHO1P40073 FKS3YMR306W 5358 nt2.38□□□□□ -2.03
SHO1P40073 RPS1AYLR441C 768 nt2.37□□□□□ -2.03
SHO1P40073 MRPL33YMR286W 261 nt2.37□□□□□ -2.03
SHO1P40073 PEX17YNL214W 600 nt2.37□□□□□ -2.03
SHO1P40073 ESF2YNR054C 951 nt2.37□□□□□ -2.03
SHO1P40073 TSC3YBR058C-A 243 nt2.37□□□□□ -2.03
SHO1P40073 MSB2YGR014W 3921 nt2.37□□□□□ -2.03
SHO1P40073 ESC1YMR219W 4977 nt2.37□□□□□ -2.03
SHO1P40073 NPR3YHL023C 3441 nt2.37□□□□□ -2.03
SHO1P40073 GCV2YMR189W 3105 nt2.37□□□□□ -2.03
SHO1P40073 RLF2YPR018W 1821 nt2.36□□□□□ -2.03
SHO1P40073 GPI19YDR437W 423 nt2.36□□□□□ -2.03
SHO1P40073 RPS7BYNL096C 573 nt2.36□□□□□ -2.03
SHO1P40073 YOL134CYOL134C 390 nt2.36□□□□□ -2.03
SHO1P40073 YBR285WYBR285W 435 nt2.36□□□□□ -2.03
SHO1P40073 NDD1YOR372C 1665 nt2.36□□□□□ -2.03
SHO1P40073 IKI3YLR384C 4050 nt2.36□□□□□ -2.03
SHO1P40073 YIL166CYIL166C 1629 nt2.35□□□□□ -2.03
SHO1P40073 POM152YMR129W 4014 nt2.35□□□□□ -2.03
SHO1P40073 SUL1YBR294W 2580 nt2.35□□□□□ -2.03
SHO1P40073 ADK1YDR226W 669 nt2.35□□□□□ -2.03
SHO1P40073 NOP19YGR251W 591 nt2.35□□□□□ -2.03
SHO1P40073 RPC10YHR143W-A 213 nt2.35□□□□□ -2.03
SHO1P40073 YIL174WYIL174W 228 nt2.35□□□□□ -2.03
SHO1P40073 YJL222W-AYJL222W-A 228 nt2.35□□□□□ -2.03
SHO1P40073 YAL026C-AYAL026C-A 438 nt2.35□□□□□ -2.03
SHO1P40073 YJR140W-AYJR140W-A 150 nt2.35□□□□□ -2.03
SHO1P40073 IRC19YLL033W 693 nt2.35□□□□□ -2.03
SHO1P40073 YAL068W-AYAL068W-A 255 nt2.35□□□□□ -2.03
SHO1P40073 YAR047CYAR047C 321 nt2.35□□□□□ -2.03
SHO1P40073 YOR053WYOR053W 342 nt2.35□□□□□ -2.03
SHO1P40073 YOR392WYOR392W 444 nt2.35□□□□□ -2.03
SHO1P40073 ECM5YMR176W 4236 nt2.35□□□□□ -2.03
SHO1P40073 DNL4YOR005C 2835 nt2.35□□□□□ -2.03
SHO1P40073 YDR239CYDR239C 2364 nt2.35□□□□□ -2.03
SHO1P40073 SSN2YDR443C 4263 nt2.34□□□□□ -2.03
SHO1P40073 CDC20YGL116W 1833 nt2.34□□□□□ -2.03
SHO1P40073 ATG31YDR022C 591 nt2.34□□□□□ -2.03
SHO1P40073 YGR025WYGR025W 303 nt2.34□□□□□ -2.03
SHO1P40073 TIM8YJR135W-A 264 nt2.34□□□□□ -2.03
SHO1P40073 YAL042C-AYAL042C-A 378 nt2.34□□□□□ -2.03
SHO1P40073 SLM6YBR266C 453 nt2.34□□□□□ -2.03
SHO1P40073 AXL1YPR122W 3627 nt2.34□□□□□ -2.04
SHO1P40073 YIL080WYIL080W 4722 nt2.33□□□□□ -2.04
SHO1P40073 PES4YFR023W 1836 nt2.33□□□□□ -2.04
SHO1P40073 YLR278CYLR278C 4026 nt2.33□□□□□ -2.04
SHO1P40073 YHL009W-AYHL009W-A 1242 nt2.33□□□□□ -2.04
SHO1P40073 YHR214W-AYHR214W-A 486 nt2.33□□□□□ -2.04
SHO1P40073 YIL058WYIL058W 285 nt2.33□□□□□ -2.04
SHO1P40073 YKL111CYKL111C 336 nt2.33□□□□□ -2.04
SHO1P40073 YAR068WYAR068W 486 nt2.33□□□□□ -2.04
SHO1P40073 FPR1YNL135C 345 nt2.33□□□□□ -2.04
SHO1P40073 COQ10YOL008W 624 nt2.33□□□□□ -2.04
SHO1P40073 YOR029WYOR029W 336 nt2.33□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 41.1 ms