Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.39□□□□□ -1.874e-12■□□□□ 9.3
XRCC6P12956 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.71□□□□□ -1.984e-12■□□□□ 9.3
XRCC6P12956 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.66□□□□□ -1.984e-12■□□□□ 9.3
XRCC6P12956 ARID3A-205ENST00000587532 1016 ntTSL 520.29■□□□□ 0.842e-6■□□□□ 9.3
XRCC6P12956 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.772e-6■□□□□ 9.3
XRCC6P12956 ARID3A-202ENST00000457152 549 ntTSL 514.58□□□□□ -0.082e-6■□□□□ 9.3
XRCC6P12956 SNORD111B-201ENST00000408587 80 ntBASIC-2.9□□□□□ -2.874e-20■□□□□ 9.3
XRCC6P12956 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC9.76□□□□□ -0.852e-23■□□□□ 9.3
XRCC6P12956 CCAR1-207ENST00000536012 2447 ntTSL 1 (best)9.46□□□□□ -0.92e-23■□□□□ 9.3
XRCC6P12956 CCAR1-214ENST00000543225 2407 ntTSL 1 (best)8.73□□□□□ -1.012e-23■□□□□ 9.3
XRCC6P12956 CCAR1-215ENST00000543229 2475 ntTSL 28.07□□□□□ -1.122e-23■□□□□ 9.3
XRCC6P12956 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.192e-23■□□□□ 9.3
XRCC6P12956 CCAR1-213ENST00000541012 2432 ntTSL 1 (best)7.06□□□□□ -1.282e-23■□□□□ 9.3
XRCC6P12956 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC7□□□□□ -1.292e-23■□□□□ 9.3
XRCC6P12956 CCAR1-205ENST00000483264 487 ntTSL 56.54□□□□□ -1.362e-23■□□□□ 9.3
XRCC6P12956 CCAR1-211ENST00000539539 3224 ntTSL 25.36□□□□□ -1.552e-23■□□□□ 9.3
XRCC6P12956 CCAR1-212ENST00000540210 3415 ntTSL 1 (best)4.39□□□□□ -1.712e-23■□□□□ 9.3
XRCC6P12956 SNORD98-201ENST00000636377 67 ntBASIC2.98□□□□□ -1.932e-23■□□□□ 9.3
XRCC6P12956 FMC1-205ENST00000488886 432 ntTSL 316.4■□□□□ 0.221e-323■□□□□ 9.3
XRCC6P12956 FMC1-203ENST00000481123 460 ntTSL 216.12■□□□□ 0.171e-323■□□□□ 9.3
XRCC6P12956 FMC1-202ENST00000468383 345 ntTSL 315.89■□□□□ 0.131e-323■□□□□ 9.3
XRCC6P12956 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC15.28■□□□□ 0.041e-323■□□□□ 9.3
XRCC6P12956 FMC1-204ENST00000482181 386 ntTSL 214.07□□□□□ -0.161e-323■□□□□ 9.3
XRCC6P12956 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.951e-20■□□□□ 9.3
XRCC6P12956 MT-TH-201ENST00000387441 69 ntBASIC4.96□□□□□ -1.621e-323■□□□□ 9.3
XRCC6P12956 MRPS6-202ENST00000477091 1061 ntTSL 519.63■□□□□ 0.734e-6■□□□□ 9.3
XRCC6P12956 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.44e-6■□□□□ 9.3
XRCC6P12956 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.02■□□□□ 0.324e-6■□□□□ 9.3
XRCC6P12956 MRPS6-205ENST00000488492 909 ntTSL 56.57□□□□□ -1.364e-6■□□□□ 9.3
XRCC6P12956 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.84e-6■□□□□ 9.3
XRCC6P12956 CYBRD1-207ENST00000494587 549 ntTSL 419.81■□□□□ 0.762e-9■□□□□ 9.2
XRCC6P12956 CYBRD1-205ENST00000468308 763 ntTSL 317.85■□□□□ 0.452e-9■□□□□ 9.2
XRCC6P12956 CYBRD1-206ENST00000474182 465 ntTSL 516.8■□□□□ 0.282e-9■□□□□ 9.2
XRCC6P12956 CYBRD1-202ENST00000375252 3540 ntTSL 1 (best) BASIC14.04□□□□□ -0.162e-9■□□□□ 9.2
XRCC6P12956 CYBRD1-201ENST00000321348 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.512e-9■□□□□ 9.2
XRCC6P12956 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC7.24□□□□□ -1.252e-9■□□□□ 9.2
XRCC6P12956 RNA5SP242-201ENST00000364171 118 ntBASIC6.2□□□□□ -1.422e-21■□□□□ 9.2
XRCC6P12956 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.75■□□□□ 0.752e-7■□□□□ 9.2
XRCC6P12956 ASH1L-201ENST00000368346 11942 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.692e-7■□□□□ 9.2
XRCC6P12956 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC9.33□□□□□ -0.922e-7■□□□□ 9.2
XRCC6P12956 PLXNA3-208ENST00000495040 421 ntTSL 529.67■■■□□ 2.346e-6■□□□□ 9.2
XRCC6P12956 GPX4-202ENST00000585362 859 ntTSL 229.27■■■□□ 2.286e-6■□□□□ 9.2
XRCC6P12956 DCXR-217ENST00000582613 617 ntTSL 228.55■■■□□ 2.166e-6■□□□□ 9.2
XRCC6P12956 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.987e-14■□□□□ 9.2
XRCC6P12956 DCXR-220ENST00000585085 927 ntTSL 526.51■■□□□ 1.836e-6■□□□□ 9.2
XRCC6P12956 REPIN1-215ENST00000495535 672 ntTSL 326.28■■□□□ 1.86e-6■□□□□ 9.2
XRCC6P12956 TRIP10-211ENST00000600491 1493 ntTSL 226.07■■□□□ 1.766e-6■□□□□ 9.2
XRCC6P12956 TRIP10-204ENST00000595319 776 ntTSL 525.84■■□□□ 1.736e-6■□□□□ 9.2
XRCC6P12956 PRRC2B-205ENST00000451855 1762 ntTSL 524.92■■□□□ 1.586e-6■□□□□ 9.2
XRCC6P12956 LARP4B-205ENST00000448368 1438 ntTSL 424.64■■□□□ 1.546e-6■□□□□ 9.2
XRCC6P12956 SEPT5-212ENST00000470814 2353 ntTSL 524.31■■□□□ 1.487e-14■□□□□ 9.2
XRCC6P12956 STXBP2-208ENST00000595800 1974 ntTSL 223.94■■□□□ 1.426e-6■□□□□ 9.2
XRCC6P12956 PRMT1-204ENST00000525616 780 ntTSL 223.91■■□□□ 1.422e-7■□□□□ 9.2
XRCC6P12956 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC23.75■■□□□ 1.395e-10■□□□□ 9.2
XRCC6P12956 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC23.62■■□□□ 1.376e-6■□□□□ 9.2
XRCC6P12956 PTBP1-212ENST00000587136 583 ntTSL 323.53■■□□□ 1.365e-10■□□□□ 9.2
XRCC6P12956 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.356e-6■□□□□ 9.2
XRCC6P12956 PTBP1-207ENST00000585932 1030 ntTSL 323.2■■□□□ 1.35e-10■□□□□ 9.2
XRCC6P12956 STXBP2-220ENST00000601061 706 ntTSL 322.65■■□□□ 1.226e-6■□□□□ 9.2
XRCC6P12956 GTPBP2-206ENST00000452781 681 ntTSL 522.3■■□□□ 1.166e-6■□□□□ 9.2
XRCC6P12956 PTBP1-219ENST00000621737 1125 ntTSL 521.92■■□□□ 1.15e-10■□□□□ 9.2
XRCC6P12956 PTBP1-208ENST00000585956 767 ntTSL 321.59■■□□□ 1.055e-10■□□□□ 9.2
XRCC6P12956 PTBP1-215ENST00000589883 683 ntTSL 321.49■■□□□ 1.035e-10■□□□□ 9.2
XRCC6P12956 PRMT1-220ENST00000534676 915 ntTSL 221.21■□□□□ 0.992e-7■□□□□ 9.2
XRCC6P12956 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.11■□□□□ 0.976e-6■□□□□ 9.2
XRCC6P12956 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.03■□□□□ 0.966e-6■□□□□ 9.2
XRCC6P12956 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.896e-6■□□□□ 9.2
XRCC6P12956 GPX4-209ENST00000593032 583 ntTSL 320.63■□□□□ 0.896e-6■□□□□ 9.2
XRCC6P12956 PRMT1-218ENST00000534280 766 ntTSL 320.54■□□□□ 0.882e-7■□□□□ 9.2
XRCC6P12956 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.866e-6■□□□□ 9.2
XRCC6P12956 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC20.42■□□□□ 0.866e-6■□□□□ 9.2
XRCC6P12956 PTBP1-210ENST00000586944 4661 ntTSL 220.42■□□□□ 0.865e-10■□□□□ 9.2
XRCC6P12956 SEPT5-207ENST00000431044 3173 ntTSL 1 (best)20.36■□□□□ 0.857e-14■□□□□ 9.2
XRCC6P12956 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.846e-6■□□□□ 9.2
XRCC6P12956 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.826e-6■□□□□ 9.2
XRCC6P12956 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.815e-10■□□□□ 9.2
XRCC6P12956 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.09■□□□□ 0.816e-6■□□□□ 9.2
XRCC6P12956 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.756e-6■□□□□ 9.2
XRCC6P12956 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.725e-10■□□□□ 9.2
XRCC6P12956 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC19.55■□□□□ 0.725e-10■□□□□ 9.2
XRCC6P12956 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.686e-6■□□□□ 9.2
XRCC6P12956 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.645e-10■□□□□ 9.2
XRCC6P12956 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.623e-11■□□□□ 9.2
XRCC6P12956 PRMT1-209ENST00000527866 968 ntTSL 218.73■□□□□ 0.596e-6■□□□□ 9.2
XRCC6P12956 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC18.7■□□□□ 0.586e-6■□□□□ 9.2
XRCC6P12956 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.566e-6■□□□□ 9.2
XRCC6P12956 PRMT1-203ENST00000524771 713 ntTSL 318.18■□□□□ 0.52e-7■□□□□ 9.2
XRCC6P12956 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.14■□□□□ 0.496e-6■□□□□ 9.2
XRCC6P12956 SEPT5-211ENST00000455843 4113 ntTSL 1 (best)17.96■□□□□ 0.477e-14■□□□□ 9.2
XRCC6P12956 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC17.86■□□□□ 0.455e-10■□□□□ 9.2
XRCC6P12956 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.446e-6■□□□□ 9.2
XRCC6P12956 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.38■□□□□ 0.376e-6■□□□□ 9.2
XRCC6P12956 STXBP2-211ENST00000597068 1785 ntTSL 1 (best)16.89■□□□□ 0.36e-6■□□□□ 9.2
XRCC6P12956 LINC02001-201ENST00000592381 1298 ntTSL 216.8■□□□□ 0.281e-8■□□□□ 9.2
XRCC6P12956 DCXR-219ENST00000584318 284 ntTSL 516.75■□□□□ 0.276e-6■□□□□ 9.2
XRCC6P12956 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.62■□□□□ 0.256e-6■□□□□ 9.2
XRCC6P12956 STXBP2-217ENST00000599737 1523 ntTSL 516.4■□□□□ 0.226e-6■□□□□ 9.2
XRCC6P12956 STXBP2-213ENST00000599278 295 ntTSL 316.36■□□□□ 0.216e-6■□□□□ 9.2
XRCC6P12956 PRMT1-214ENST00000529836 580 ntTSL 316.07■□□□□ 0.162e-7■□□□□ 9.2
XRCC6P12956 TRIP10-207ENST00000596673 586 ntTSL 316.04■□□□□ 0.166e-6■□□□□ 9.2
Retrieved 100 of 6,788 protein–RNA pairs in 145.7 ms