Protein–RNA interactions for Protein: Q6ZMY6

WDR88, WD repeat-containing protein 88, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WDR88Q6ZMY6 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
WDR88Q6ZMY6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
WDR88Q6ZMY6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.71■□□□□ 0.59
WDR88Q6ZMY6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.71■□□□□ 0.59
WDR88Q6ZMY6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
WDR88Q6ZMY6 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
WDR88Q6ZMY6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
WDR88Q6ZMY6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
WDR88Q6ZMY6 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
WDR88Q6ZMY6 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.71■□□□□ 0.59
WDR88Q6ZMY6 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
WDR88Q6ZMY6 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
WDR88Q6ZMY6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
WDR88Q6ZMY6 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
WDR88Q6ZMY6 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
WDR88Q6ZMY6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.7■□□□□ 0.58
WDR88Q6ZMY6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
WDR88Q6ZMY6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
WDR88Q6ZMY6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
WDR88Q6ZMY6 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
WDR88Q6ZMY6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.7■□□□□ 0.58
WDR88Q6ZMY6 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
WDR88Q6ZMY6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.7■□□□□ 0.58
WDR88Q6ZMY6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.7■□□□□ 0.58
WDR88Q6ZMY6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.7■□□□□ 0.58
WDR88Q6ZMY6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.7■□□□□ 0.58
WDR88Q6ZMY6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.7■□□□□ 0.58
WDR88Q6ZMY6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.7■□□□□ 0.58
WDR88Q6ZMY6 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.7■□□□□ 0.58
WDR88Q6ZMY6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
WDR88Q6ZMY6 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
WDR88Q6ZMY6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
WDR88Q6ZMY6 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.7■□□□□ 0.58
WDR88Q6ZMY6 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
WDR88Q6ZMY6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
WDR88Q6ZMY6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
WDR88Q6ZMY6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.69■□□□□ 0.58
WDR88Q6ZMY6 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
WDR88Q6ZMY6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
WDR88Q6ZMY6 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
WDR88Q6ZMY6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.69■□□□□ 0.58
WDR88Q6ZMY6 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
WDR88Q6ZMY6 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
WDR88Q6ZMY6 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
WDR88Q6ZMY6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
WDR88Q6ZMY6 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
WDR88Q6ZMY6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
WDR88Q6ZMY6 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.69■□□□□ 0.58
WDR88Q6ZMY6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
WDR88Q6ZMY6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
WDR88Q6ZMY6 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
WDR88Q6ZMY6 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
WDR88Q6ZMY6 AC112907.3-201ENST00000577781 2400 ntBASIC18.69■□□□□ 0.58
WDR88Q6ZMY6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
WDR88Q6ZMY6 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
WDR88Q6ZMY6 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.68■□□□□ 0.58
WDR88Q6ZMY6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
WDR88Q6ZMY6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
WDR88Q6ZMY6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
WDR88Q6ZMY6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
WDR88Q6ZMY6 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.68■□□□□ 0.58
WDR88Q6ZMY6 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
WDR88Q6ZMY6 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
WDR88Q6ZMY6 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
WDR88Q6ZMY6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
WDR88Q6ZMY6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
WDR88Q6ZMY6 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.68■□□□□ 0.58
WDR88Q6ZMY6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.68■□□□□ 0.58
WDR88Q6ZMY6 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.68■□□□□ 0.58
WDR88Q6ZMY6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.68■□□□□ 0.58
WDR88Q6ZMY6 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.68■□□□□ 0.58
WDR88Q6ZMY6 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
WDR88Q6ZMY6 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
WDR88Q6ZMY6 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
WDR88Q6ZMY6 AC116050.2-201ENST00000612102 1779 ntBASIC18.68■□□□□ 0.58
WDR88Q6ZMY6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
WDR88Q6ZMY6 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
WDR88Q6ZMY6 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.67■□□□□ 0.58
WDR88Q6ZMY6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.67■□□□□ 0.58
WDR88Q6ZMY6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
WDR88Q6ZMY6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
WDR88Q6ZMY6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
WDR88Q6ZMY6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
WDR88Q6ZMY6 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
WDR88Q6ZMY6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.67■□□□□ 0.58
WDR88Q6ZMY6 KRT18P20-201ENST00000548986 1279 ntBASIC18.67■□□□□ 0.58
WDR88Q6ZMY6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.67■□□□□ 0.58
WDR88Q6ZMY6 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
WDR88Q6ZMY6 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.67■□□□□ 0.58
WDR88Q6ZMY6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
WDR88Q6ZMY6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.67■□□□□ 0.58
WDR88Q6ZMY6 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
WDR88Q6ZMY6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
WDR88Q6ZMY6 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
WDR88Q6ZMY6 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
WDR88Q6ZMY6 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
WDR88Q6ZMY6 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
WDR88Q6ZMY6 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.66■□□□□ 0.58
WDR88Q6ZMY6 RBM17P2-201ENST00000616397 1405 ntBASIC18.66■□□□□ 0.58
WDR88Q6ZMY6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 467.4 ms