Protein–RNA interactions for Protein: Q08387

DNL4, DNA ligase 4, yeastyeast

Predicted RBP Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DNL4Q08387 YBR062CYBR062C 543 nt2.38□□□□□ -2.03
DNL4Q08387 YPR014CYPR014C 330 nt2.38□□□□□ -2.03
DNL4Q08387 SPB1YCL054W 2526 nt2.38□□□□□ -2.03
DNL4Q08387 STH1YIL126W 4080 nt2.38□□□□□ -2.03
DNL4Q08387 NCS2YNL119W 1482 nt2.38□□□□□ -2.03
DNL4Q08387 SHS1YDL225W 1656 nt2.37□□□□□ -2.03
DNL4Q08387 VPS13YLL040C 9435 nt2.37□□□□□ -2.03
DNL4Q08387 YCR090CYCR090C 549 nt2.37□□□□□ -2.03
DNL4Q08387 YCR108CYCR108C 192 nt2.37□□□□□ -2.03
DNL4Q08387 SCEIQ0160 708 nt2.37□□□□□ -2.03
DNL4Q08387 OTU2YHL013C 924 nt2.37□□□□□ -2.03
DNL4Q08387 LRP1YHR081W 555 nt2.37□□□□□ -2.03
DNL4Q08387 YIL029CYIL029C 429 nt2.37□□□□□ -2.03
DNL4Q08387 HEM4YOR278W 828 nt2.37□□□□□ -2.03
DNL4Q08387 RSA1YPL193W 1146 nt2.37□□□□□ -2.03
DNL4Q08387 DNL4YOR005C 2835 nt2.37□□□□□ -2.03
DNL4Q08387 IRA2YOL081W 9240 nt2.37□□□□□ -2.03
DNL4Q08387 YIL080WYIL080W 4722 nt2.37□□□□□ -2.03
DNL4Q08387 AFR1YDR085C 1863 nt2.37□□□□□ -2.03
DNL4Q08387 RGA1YOR127W 3024 nt2.36□□□□□ -2.03
DNL4Q08387 YDL187CYDL187C 330 nt2.36□□□□□ -2.03
DNL4Q08387 YER107W-AYER107W-A 321 nt2.36□□□□□ -2.03
DNL4Q08387 ILM1YJR118C 612 nt2.36□□□□□ -2.03
DNL4Q08387 MRP49YKL167C 414 nt2.36□□□□□ -2.03
DNL4Q08387 VPS51YKR020W 495 nt2.36□□□□□ -2.03
DNL4Q08387 YOR032W-AYOR032W-A 201 nt2.36□□□□□ -2.03
DNL4Q08387 YOR364WYOR364W 369 nt2.36□□□□□ -2.03
DNL4Q08387 ISU1YPL135W 498 nt2.36□□□□□ -2.03
DNL4Q08387 FUS1YCL027W 1539 nt2.36□□□□□ -2.03
DNL4Q08387 snR59snR59 78 nt2.35□□□□□ -2.03
DNL4Q08387 YDR220CYDR220C 294 nt2.35□□□□□ -2.03
DNL4Q08387 MTC7YEL033W 420 nt2.35□□□□□ -2.03
DNL4Q08387 PEX4YGR133W 552 nt2.35□□□□□ -2.03
DNL4Q08387 ACF4YJR083C 930 nt2.35□□□□□ -2.03
DNL4Q08387 YLR224WYLR224W 1110 nt2.35□□□□□ -2.03
DNL4Q08387 SWS2YNL081C 432 nt2.35□□□□□ -2.03
DNL4Q08387 YOL013W-BYOL013W-B 291 nt2.35□□□□□ -2.03
DNL4Q08387 NPR3YHL023C 3441 nt2.35□□□□□ -2.03
DNL4Q08387 GAL80YML051W 1308 nt2.35□□□□□ -2.03
DNL4Q08387 YDR338CYDR338C 2088 nt2.35□□□□□ -2.03
DNL4Q08387 SEC16YPL085W 6588 nt2.35□□□□□ -2.03
DNL4Q08387 SVL3YPL032C 2478 nt2.34□□□□□ -2.03
DNL4Q08387 KAP123YER110C 3342 nt2.34□□□□□ -2.03
DNL4Q08387 SDC25YLL016W 3147 nt2.34□□□□□ -2.03
DNL4Q08387 YFH1YDL120W 525 nt2.34□□□□□ -2.03
DNL4Q08387 CIC1YHR052W 1131 nt2.34□□□□□ -2.03
DNL4Q08387 BET4YJL031C 984 nt2.34□□□□□ -2.03
DNL4Q08387 CSE4YKL049C 690 nt2.34□□□□□ -2.03
DNL4Q08387 YLR255CYLR255C 354 nt2.34□□□□□ -2.03
DNL4Q08387 RPS22BYLR367W 393 nt2.34□□□□□ -2.03
DNL4Q08387 VMA9YCL005W-A 222 nt2.34□□□□□ -2.03
DNL4Q08387 AMS1YGL156W 3252 nt2.34□□□□□ -2.03
DNL4Q08387 PCK1YKR097W 1650 nt2.34□□□□□ -2.04
DNL4Q08387 UTP22YGR090W 3714 nt2.33□□□□□ -2.04
DNL4Q08387 KAR9YPL269W 1935 nt2.33□□□□□ -2.04
DNL4Q08387 YRB1YDR002W 606 nt2.33□□□□□ -2.04
DNL4Q08387 GCN4YEL009C 846 nt2.33□□□□□ -2.04
DNL4Q08387 PRM8YGL053W 714 nt2.33□□□□□ -2.04
DNL4Q08387 VAR1Q0140 1197 nt2.33□□□□□ -2.04
DNL4Q08387 YHR180W-AYHR180W-A 183 nt2.33□□□□□ -2.04
DNL4Q08387 YAL042C-AYAL042C-A 378 nt2.33□□□□□ -2.04
DNL4Q08387 LCL2YLR104W 396 nt2.33□□□□□ -2.04
DNL4Q08387 SSP1YHR184W 1716 nt2.33□□□□□ -2.04
DNL4Q08387 CLN3YAL040C 1743 nt2.33□□□□□ -2.04
DNL4Q08387 RLF2YPR018W 1821 nt2.33□□□□□ -2.04
DNL4Q08387 SCY1YGL083W 2415 nt2.32□□□□□ -2.04
DNL4Q08387 PUF4YGL014W 2667 nt2.32□□□□□ -2.04
DNL4Q08387 RVS161YCR009C 798 nt2.32□□□□□ -2.04
DNL4Q08387 snR76snR76 109 nt2.32□□□□□ -2.04
DNL4Q08387 YDR537CYDR537C 606 nt2.32□□□□□ -2.04
DNL4Q08387 BRP1YGL007W 378 nt2.32□□□□□ -2.04
DNL4Q08387 RTS3YGR161C 792 nt2.32□□□□□ -2.04
DNL4Q08387 RPF1YHR088W 888 nt2.32□□□□□ -2.04
DNL4Q08387 RRT16YNL105W 429 nt2.32□□□□□ -2.04
DNL4Q08387 ATP19YOL077W-A 207 nt2.32□□□□□ -2.04
DNL4Q08387 CRS5YOR031W 210 nt2.32□□□□□ -2.04
DNL4Q08387 PET123YOR158W 957 nt2.32□□□□□ -2.04
DNL4Q08387 ALG14YBR070C 714 nt2.32□□□□□ -2.04
DNL4Q08387 SHE4YOR035C 2370 nt2.32□□□□□ -2.04
DNL4Q08387 YOR343W-AYOR343W-A 1317 nt2.32□□□□□ -2.04
DNL4Q08387 YDR179W-AYDR179W-A 1392 nt2.32□□□□□ -2.04
DNL4Q08387 SSE1YPL106C 2082 nt2.32□□□□□ -2.04
DNL4Q08387 COG3YER157W 2406 nt2.31□□□□□ -2.04
DNL4Q08387 YJL086CYJL086C 369 nt2.31□□□□□ -2.04
DNL4Q08387 COX8YLR395C 237 nt2.31□□□□□ -2.04
DNL4Q08387 ESF2YNR054C 951 nt2.31□□□□□ -2.04
DNL4Q08387 BNI1YNL271C 5862 nt2.31□□□□□ -2.04
DNL4Q08387 GPI19YDR437W 423 nt2.3□□□□□ -2.04
DNL4Q08387 YGR050CYGR050C 357 nt2.3□□□□□ -2.04
DNL4Q08387 RPL36AYMR194W 303 nt2.3□□□□□ -2.04
DNL4Q08387 MSS18YPR134W 807 nt2.3□□□□□ -2.04
DNL4Q08387 SWA2YDR320C 2007 nt2.3□□□□□ -2.04
DNL4Q08387 ALK2YBL009W 2031 nt2.3□□□□□ -2.04
DNL4Q08387 IRC8YJL051W 2469 nt2.3□□□□□ -2.04
DNL4Q08387 ALY1YKR021W 2748 nt2.29□□□□□ -2.04
DNL4Q08387 TRZ1YKR079C 2517 nt2.29□□□□□ -2.04
DNL4Q08387 SNU56YDR240C 1479 nt2.29□□□□□ -2.04
DNL4Q08387 BFR1YOR198C 1413 nt2.29□□□□□ -2.04
DNL4Q08387 EAF6YJR082C 342 nt2.29□□□□□ -2.04
DNL4Q08387 FYV7YLR068W 456 nt2.29□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 49.1 ms