Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 OST6YML019W 999 nt3.31□□□□□ -1.88
SSL2Q00578 ADI1YMR009W 540 nt3.31□□□□□ -1.88
SSL2Q00578 RSM19YNR037C 276 nt3.31□□□□□ -1.88
SSL2Q00578 snR42snR42 351 nt3.31□□□□□ -1.88
SSL2Q00578 ENA5YDR038C 3276 nt3.31□□□□□ -1.88
SSL2Q00578 ICR1ICR1 3199 nt3.31□□□□□ -1.88
SSL2Q00578 MSH4YFL003C 2637 nt3.31□□□□□ -1.88
SSL2Q00578 MKT1YNL085W 2493 nt3.31□□□□□ -1.88
SSL2Q00578 MRH1YDR033W 963 nt3.3□□□□□ -1.88
SSL2Q00578 PEX4YGR133W 552 nt3.3□□□□□ -1.88
SSL2Q00578 LAG1YHL003C 1236 nt3.3□□□□□ -1.88
SSL2Q00578 AIM32YML050W 936 nt3.3□□□□□ -1.88
SSL2Q00578 OST2YOR103C 393 nt3.3□□□□□ -1.88
SSL2Q00578 CDH1YGL003C 1701 nt3.3□□□□□ -1.88
SSL2Q00578 EMP70YLR083C 2004 nt3.29□□□□□ -1.88
SSL2Q00578 TOM70YNL121C 1854 nt3.29□□□□□ -1.88
SSL2Q00578 YDL068WYDL068W 330 nt3.29□□□□□ -1.88
SSL2Q00578 YDR102CYDR102C 333 nt3.29□□□□□ -1.88
SSL2Q00578 COX23YHR116W 456 nt3.29□□□□□ -1.88
SSL2Q00578 YPL142CYPL142C 318 nt3.29□□□□□ -1.88
SSL2Q00578 YDR061WYDR061W 1620 nt3.29□□□□□ -1.88
SSL2Q00578 YDR210W-BYDR210W-B 5313 nt3.28□□□□□ -1.88
SSL2Q00578 YDR261W-BYDR261W-B 5313 nt3.28□□□□□ -1.88
SSL2Q00578 YFL002W-AYFL002W-A 5313 nt3.28□□□□□ -1.88
SSL2Q00578 YGR161W-BYGR161W-B 5313 nt3.28□□□□□ -1.88
SSL2Q00578 YLR410W-BYLR410W-B 5313 nt3.28□□□□□ -1.88
SSL2Q00578 YCL019WYCL019W 5313 nt3.28□□□□□ -1.88
SSL2Q00578 SPP382YLR424W 2127 nt3.28□□□□□ -1.88
SSL2Q00578 YGR107WYGR107W 450 nt3.28□□□□□ -1.88
SSL2Q00578 SIP18YMR175W 240 nt3.28□□□□□ -1.88
SSL2Q00578 HHT2YNL031C 411 nt3.28□□□□□ -1.88
SSL2Q00578 YOR146WYOR146W 306 nt3.28□□□□□ -1.88
SSL2Q00578 TIM18YOR297C 579 nt3.28□□□□□ -1.88
SSL2Q00578 YPL276WYPL276W 438 nt3.28□□□□□ -1.88
SSL2Q00578 LRG1YDL240W 3054 nt3.28□□□□□ -1.88
SSL2Q00578 STE23YLR389C 3084 nt3.28□□□□□ -1.88
SSL2Q00578 YJR003CYJR003C 1560 nt3.28□□□□□ -1.88
SSL2Q00578 EXO84YBR102C 2262 nt3.28□□□□□ -1.88
SSL2Q00578 YGR067CYGR067C 2415 nt3.28□□□□□ -1.89
SSL2Q00578 YEL1YBL060W 2064 nt3.28□□□□□ -1.89
SSL2Q00578 CBP2YHL038C 1893 nt3.27□□□□□ -1.89
SSL2Q00578 AST2YER101C 1293 nt3.27□□□□□ -1.89
SSL2Q00578 YFL032WYFL032W 321 nt3.27□□□□□ -1.89
SSL2Q00578 YMR290W-AYMR290W-A 348 nt3.27□□□□□ -1.89
SSL2Q00578 snR13snR13 124 nt3.27□□□□□ -1.89
SSL2Q00578 SMC2YFR031C 3513 nt3.27□□□□□ -1.89
SSL2Q00578 GIS4YML006C 2325 nt3.27□□□□□ -1.89
SSL2Q00578 NIC96YFR002W 2520 nt3.27□□□□□ -1.89
SSL2Q00578 DUF1YOL087C 3351 nt3.26□□□□□ -1.89
SSL2Q00578 YCR018C-AYCR018C-A 255 nt3.26□□□□□ -1.89
SSL2Q00578 RPS22AYJL190C 393 nt3.26□□□□□ -1.89
SSL2Q00578 LSM2YBL026W 288 nt3.26□□□□□ -1.89
SSL2Q00578 YBL108WYBL108W 306 nt3.26□□□□□ -1.89
SSL2Q00578 SSP1YHR184W 1716 nt3.26□□□□□ -1.89
SSL2Q00578 RRM3YHR031C 2172 nt3.26□□□□□ -1.89
SSL2Q00578 TCP1YDR212W 1680 nt3.26□□□□□ -1.89
SSL2Q00578 PBS2YJL128C 2007 nt3.26□□□□□ -1.89
SSL2Q00578 ITC1YGL133W 3795 nt3.25□□□□□ -1.89
SSL2Q00578 YCR081C-AYCR081C-A 237 nt3.25□□□□□ -1.89
SSL2Q00578 LSM8YJR022W 330 nt3.25□□□□□ -1.89
SSL2Q00578 YLR154C-HYLR154C-H 132 nt3.25□□□□□ -1.89
SSL2Q00578 YLR156C-AYLR156C-A 132 nt3.25□□□□□ -1.89
SSL2Q00578 YLR157C-CYLR157C-C 132 nt3.25□□□□□ -1.89
SSL2Q00578 YLR159C-AYLR159C-A 132 nt3.25□□□□□ -1.89
SSL2Q00578 DIE2YGR227W 1578 nt3.25□□□□□ -1.89
SSL2Q00578 TAO3YIL129C 7131 nt3.25□□□□□ -1.89
SSL2Q00578 BNI4YNL233W 2679 nt3.25□□□□□ -1.89
SSL2Q00578 KHA1YJL094C 2622 nt3.24□□□□□ -1.89
SSL2Q00578 ILS1YBL076C 3219 nt3.24□□□□□ -1.89
SSL2Q00578 BCH1YMR237W 2175 nt3.24□□□□□ -1.89
SSL2Q00578 RPS26BYER131W 360 nt3.24□□□□□ -1.89
SSL2Q00578 YHR063W-AYHR063W-A 336 nt3.24□□□□□ -1.89
SSL2Q00578 PET191YJR034W 327 nt3.24□□□□□ -1.89
SSL2Q00578 YMR320WYMR320W 306 nt3.24□□□□□ -1.89
SSL2Q00578 HSP10YOR020C 321 nt3.24□□□□□ -1.89
SSL2Q00578 FLO5YHR211W 3228 nt3.24□□□□□ -1.89
SSL2Q00578 MED1YPR070W 1701 nt3.24□□□□□ -1.89
SSL2Q00578 YKL222CYKL222C 2118 nt3.23□□□□□ -1.89
SSL2Q00578 TLC1TLC1 1301 nt3.23□□□□□ -1.89
SSL2Q00578 GPI8YDR331W 1236 nt3.23□□□□□ -1.89
SSL2Q00578 SPG3YDR504C 384 nt3.23□□□□□ -1.89
SSL2Q00578 RPL19BYBL027W 570 nt3.23□□□□□ -1.89
SSL2Q00578 DGK1YOR311C 873 nt3.23□□□□□ -1.89
SSL2Q00578 YPL039WYPL039W 951 nt3.23□□□□□ -1.89
SSL2Q00578 YSP2YDR326C 4317 nt3.23□□□□□ -1.89
SSL2Q00578 YLR278CYLR278C 4026 nt3.22□□□□□ -1.89
SSL2Q00578 PDS5YMR076C 3834 nt3.22□□□□□ -1.89
SSL2Q00578 DYN2YDR424C 279 nt3.22□□□□□ -1.89
SSL2Q00578 YEL018C-AYEL018C-A 534 nt3.22□□□□□ -1.89
SSL2Q00578 YHL005CYHL005C 393 nt3.22□□□□□ -1.89
SSL2Q00578 YHR214W-AYHR214W-A 486 nt3.22□□□□□ -1.89
SSL2Q00578 PAU23YLR037C 375 nt3.22□□□□□ -1.89
SSL2Q00578 YAR068WYAR068W 486 nt3.22□□□□□ -1.89
SSL2Q00578 URB2YJR041C 3525 nt3.22□□□□□ -1.89
SSL2Q00578 CDC20YGL116W 1833 nt3.21□□□□□ -1.89
SSL2Q00578 ROG1YGL144C 2058 nt3.21□□□□□ -1.89
SSL2Q00578 STE5YDR103W 2754 nt3.21□□□□□ -1.9
SSL2Q00578 YIL012WYIL012W 342 nt3.21□□□□□ -1.9
SSL2Q00578 tW(UCA)QtW(UCA)Q 74 nt3.21□□□□□ -1.9
SSL2Q00578 YKL183C-AYKL183C-A 213 nt3.21□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 52.4 ms