Protein–RNA interactions for Protein: P53836

CAF120, CCR4-NOT transcriptional complex subunit CAF120, yeastyeast

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF120P53836 YHR078WYHR078W 1659 nt4.26□□□□□ -1.73
CAF120P53836 YGL074CYGL074C 327 nt4.26□□□□□ -1.73
CAF120P53836 FMP46YKR049C 402 nt4.26□□□□□ -1.73
CAF120P53836 UBP5YER144C 2418 nt4.26□□□□□ -1.73
CAF120P53836 ATG26YLR189C 3597 nt4.26□□□□□ -1.73
CAF120P53836 GUP1YGL084C 1683 nt4.26□□□□□ -1.73
CAF120P53836 TDA1YMR291W 1761 nt4.25□□□□□ -1.73
CAF120P53836 YNL067W-BYNL067W-B 141 nt4.25□□□□□ -1.73
CAF120P53836 SUI1YNL244C 327 nt4.25□□□□□ -1.73
CAF120P53836 YOL153CYOL153C 1746 nt4.25□□□□□ -1.73
CAF120P53836 YPR002C-AYPR002C-A 198 nt4.25□□□□□ -1.73
CAF120P53836 YLR001CYLR001C 2589 nt4.25□□□□□ -1.73
CAF120P53836 PHM7YOL084W 2976 nt4.25□□□□□ -1.73
CAF120P53836 DAP2YHR028C 2457 nt4.24□□□□□ -1.73
CAF120P53836 HUL5YGL141W 2733 nt4.24□□□□□ -1.73
CAF120P53836 PSP1YDR505C 2526 nt4.24□□□□□ -1.73
CAF120P53836 AIP1YMR092C 1848 nt4.24□□□□□ -1.73
CAF120P53836 snR61snR61 90 nt4.24□□□□□ -1.73
CAF120P53836 HPA3YEL066W 540 nt4.24□□□□□ -1.73
CAF120P53836 POG1YIL122W 1056 nt4.24□□□□□ -1.73
CAF120P53836 YKL111CYKL111C 336 nt4.24□□□□□ -1.73
CAF120P53836 NHX1YDR456W 1902 nt4.24□□□□□ -1.73
CAF120P53836 NAT1YDL040C 2565 nt4.24□□□□□ -1.73
CAF120P53836 NAN1YPL126W 2691 nt4.24□□□□□ -1.73
CAF120P53836 MSR1YHR091C 1932 nt4.23□□□□□ -1.73
CAF120P53836 KRI1YNL308C 1776 nt4.23□□□□□ -1.73
CAF120P53836 snR60snR60 104 nt4.23□□□□□ -1.73
CAF120P53836 ARF1YDL192W 546 nt4.23□□□□□ -1.73
CAF120P53836 VPS41YDR080W 2979 nt4.23□□□□□ -1.73
CAF120P53836 RPS24AYER074W 408 nt4.23□□□□□ -1.73
CAF120P53836 YHR212CYHR212C 336 nt4.23□□□□□ -1.73
CAF120P53836 YJR140W-AYJR140W-A 150 nt4.23□□□□□ -1.73
CAF120P53836 YLR120W-AYLR120W-A 102 nt4.23□□□□□ -1.73
CAF120P53836 YAR060CYAR060C 336 nt4.23□□□□□ -1.73
CAF120P53836 RPS22BYLR367W 393 nt4.23□□□□□ -1.73
CAF120P53836 YOR376WYOR376W 369 nt4.23□□□□□ -1.73
CAF120P53836 ATP22YDR350C 2055 nt4.23□□□□□ -1.73
CAF120P53836 SSE1YPL106C 2082 nt4.23□□□□□ -1.73
CAF120P53836 PEX6YNL329C 3093 nt4.23□□□□□ -1.73
CAF120P53836 GCR1YPL075W 2358 nt4.22□□□□□ -1.73
CAF120P53836 KIC1YHR102W 3243 nt4.22□□□□□ -1.73
CAF120P53836 OLE1YGL055W 1533 nt4.22□□□□□ -1.73
CAF120P53836 snR62snR62 100 nt4.22□□□□□ -1.73
CAF120P53836 RPS18AYDR450W 441 nt4.22□□□□□ -1.73
CAF120P53836 FMP32YFL046W 624 nt4.22□□□□□ -1.73
CAF120P53836 LSM2YBL026W 288 nt4.22□□□□□ -1.73
CAF120P53836 YNL028WYNL028W 318 nt4.22□□□□□ -1.73
CAF120P53836 YOR314W-AYOR314W-A 111 nt4.22□□□□□ -1.73
CAF120P53836 OAF3YKR064W 2592 nt4.22□□□□□ -1.73
CAF120P53836 FKH2YNL068C 2589 nt4.22□□□□□ -1.73
CAF120P53836 ASG1YIL130W 2895 nt4.21□□□□□ -1.73
CAF120P53836 REV1YOR346W 2958 nt4.21□□□□□ -1.74
CAF120P53836 NUP85YJR042W 2235 nt4.21□□□□□ -1.74
CAF120P53836 YSH1YLR277C 2340 nt4.21□□□□□ -1.74
CAF120P53836 YDR250CYDR250C 276 nt4.21□□□□□ -1.74
CAF120P53836 RPL37AYLR185W 267 nt4.21□□□□□ -1.74
CAF120P53836 DNM1YLL001W 2274 nt4.21□□□□□ -1.74
CAF120P53836 RED1YLR263W 2484 nt4.2□□□□□ -1.74
CAF120P53836 MDM32YOR147W 1869 nt4.2□□□□□ -1.74
CAF120P53836 LCB4YOR171C 1875 nt4.2□□□□□ -1.74
CAF120P53836 YKR033CYKR033C 426 nt4.2□□□□□ -1.74
CAF120P53836 YOL085W-AYOL085W-A 213 nt4.2□□□□□ -1.74
CAF120P53836 SRP68YPL243W 1800 nt4.2□□□□□ -1.74
CAF120P53836 YEL1YBL060W 2064 nt4.19□□□□□ -1.74
CAF120P53836 LSM1YJL124C 519 nt4.19□□□□□ -1.74
CAF120P53836 APC9YLR102C 798 nt4.19□□□□□ -1.74
CAF120P53836 EGT2YNL327W 3126 nt4.18□□□□□ -1.74
CAF120P53836 YKL165C-AYKL165C-A 234 nt4.18□□□□□ -1.74
CAF120P53836 UPS1YLR193C 528 nt4.18□□□□□ -1.74
CAF120P53836 NKP2YLR315W 462 nt4.18□□□□□ -1.74
CAF120P53836 YOR015WYOR015W 360 nt4.18□□□□□ -1.74
CAF120P53836 ELM1YKL048C 1923 nt4.18□□□□□ -1.74
CAF120P53836 MNN4YKL201C 3537 nt4.18□□□□□ -1.74
CAF120P53836 MSK1YNL073W 1731 nt4.18□□□□□ -1.74
CAF120P53836 HMG1YML075C 3165 nt4.17□□□□□ -1.74
CAF120P53836 TIM13YGR181W 318 nt4.17□□□□□ -1.74
CAF120P53836 YJR112W-AYJR112W-A 330 nt4.17□□□□□ -1.74
CAF120P53836 YKL222CYKL222C 2118 nt4.17□□□□□ -1.74
CAF120P53836 RPG1YBR079C 2895 nt4.17□□□□□ -1.74
CAF120P53836 PRM15YMR278W 1869 nt4.17□□□□□ -1.74
CAF120P53836 APC5YOR249C 2058 nt4.17□□□□□ -1.74
CAF120P53836 PFK26YIL107C 2484 nt4.16□□□□□ -1.74
CAF120P53836 OSH2YDL019C 3852 nt4.16□□□□□ -1.74
CAF120P53836 SEN1YLR430W 6696 nt4.16□□□□□ -1.74
CAF120P53836 AIM9YER080W 1884 nt4.16□□□□□ -1.74
CAF120P53836 HHT1YBR010W 411 nt4.16□□□□□ -1.74
CAF120P53836 YBR182C-AYBR182C-A 195 nt4.16□□□□□ -1.74
CAF120P53836 IMH1YLR309C 2736 nt4.15□□□□□ -1.74
CAF120P53836 DPB11YJL090C 2295 nt4.15□□□□□ -1.74
CAF120P53836 PEP5YMR231W 3090 nt4.15□□□□□ -1.75
CAF120P53836 YDR340WYDR340W 303 nt4.15□□□□□ -1.75
CAF120P53836 RPS26BYER131W 360 nt4.15□□□□□ -1.75
CAF120P53836 YJL020W-AYJL020W-A 258 nt4.15□□□□□ -1.75
CAF120P53836 PAU23YLR037C 375 nt4.15□□□□□ -1.75
CAF120P53836 VAC7YNL054W 3498 nt4.15□□□□□ -1.75
CAF120P53836 RAD1YPL022W 3303 nt4.15□□□□□ -1.75
CAF120P53836 CYM1YDR430C 2970 nt4.15□□□□□ -1.75
CAF120P53836 HOS3YPL116W 2094 nt4.15□□□□□ -1.75
CAF120P53836 JHD2YJR119C 2187 nt4.14□□□□□ -1.75
CAF120P53836 SWA2YDR320C 2007 nt4.14□□□□□ -1.75
Retrieved 100 of 7,029 protein–RNA pairs in 49 ms