Protein–RNA interactions for Protein: P53044

UFD1, Ubiquitin fusion degradation protein 1, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD1P53044 RPS17BYDR447C 411 nt1.93□□□□□ -2.1
UFD1P53044 YER189WYER189W 369 nt1.93□□□□□ -2.1
UFD1P53044 YFL012W-AYFL012W-A 375 nt1.93□□□□□ -2.1
UFD1P53044 FAR7YFR008W 666 nt1.93□□□□□ -2.1
UFD1P53044 SDL1YIL167W 633 nt1.93□□□□□ -2.1
UFD1P53044 PRP21YJL203W 843 nt1.93□□□□□ -2.1
UFD1P53044 PSY1YKL076C 384 nt1.93□□□□□ -2.1
UFD1P53044 ECM9YKR004C 1134 nt1.93□□□□□ -2.1
UFD1P53044 YAL059C-AYAL059C-A 423 nt1.93□□□□□ -2.1
UFD1P53044 YMR144WYMR144W 1029 nt1.93□□□□□ -2.1
UFD1P53044 RGM1YMR182C 636 nt1.93□□□□□ -2.1
UFD1P53044 MUD1YBR119W 897 nt1.93□□□□□ -2.1
UFD1P53044 SPP41YDR464W 4308 nt1.93□□□□□ -2.1
UFD1P53044 YIL166CYIL166C 1629 nt1.92□□□□□ -2.1
UFD1P53044 RRP12YPL012W 3687 nt1.92□□□□□ -2.1
UFD1P53044 CLN3YAL040C 1743 nt1.92□□□□□ -2.1
UFD1P53044 TAE2YPL009C 3117 nt1.92□□□□□ -2.1
UFD1P53044 YPR097WYPR097W 3222 nt1.92□□□□□ -2.1
UFD1P53044 ADK1YDR226W 669 nt1.92□□□□□ -2.1
UFD1P53044 YDR537CYDR537C 606 nt1.92□□□□□ -2.1
UFD1P53044 GLC7YER133W 939 nt1.92□□□□□ -2.1
UFD1P53044 YHR054CYHR054C 1065 nt1.92□□□□□ -2.1
UFD1P53044 FYV4YHR059W 393 nt1.92□□□□□ -2.1
UFD1P53044 ACF4YJR083C 930 nt1.92□□□□□ -2.1
UFD1P53044 RPL36AYMR194W 303 nt1.92□□□□□ -2.1
UFD1P53044 GIM3YNL153C 390 nt1.92□□□□□ -2.1
UFD1P53044 YOL029CYOL029C 606 nt1.92□□□□□ -2.1
UFD1P53044 CSM4YPL200W 471 nt1.92□□□□□ -2.1
UFD1P53044 YPR147CYPR147C 915 nt1.92□□□□□ -2.1
UFD1P53044 VID24YBR105C 1089 nt1.92□□□□□ -2.1
UFD1P53044 SDC25YLL016W 3147 nt1.92□□□□□ -2.1
UFD1P53044 SHE4YOR035C 2370 nt1.91□□□□□ -2.1
UFD1P53044 YDR461C-AYDR461C-A 243 nt1.91□□□□□ -2.1
UFD1P53044 AIM18YHR198C 966 nt1.91□□□□□ -2.1
UFD1P53044 DGK1YOR311C 873 nt1.91□□□□□ -2.1
UFD1P53044 YPR145C-AYPR145C-A 237 nt1.91□□□□□ -2.1
UFD1P53044 ARR2YPR200C 393 nt1.91□□□□□ -2.1
UFD1P53044 BAS1YKR099W 2436 nt1.91□□□□□ -2.1
UFD1P53044 UBP2YOR124C 3819 nt1.91□□□□□ -2.1
UFD1P53044 NPR3YHL023C 3441 nt1.91□□□□□ -2.1
UFD1P53044 SAP190YKR028W 3102 nt1.91□□□□□ -2.1
UFD1P53044 HOS4YIL112W 3252 nt1.9□□□□□ -2.1
UFD1P53044 ROY1YMR258C 1662 nt1.9□□□□□ -2.1
UFD1P53044 USO1YDL058W 5373 nt1.9□□□□□ -2.1
UFD1P53044 YNL018CYNL018C 1839 nt1.9□□□□□ -2.11
UFD1P53044 GPI19YDR437W 423 nt1.9□□□□□ -2.11
UFD1P53044 VTC1YER072W 390 nt1.9□□□□□ -2.11
UFD1P53044 YJL052C-AYJL052C-A 120 nt1.9□□□□□ -2.11
UFD1P53044 YJR087WYJR087W 351 nt1.9□□□□□ -2.11
UFD1P53044 VPH2YKL119C 648 nt1.9□□□□□ -2.11
UFD1P53044 TMA10YLR327C 261 nt1.9□□□□□ -2.11
UFD1P53044 ATP18YML081C-A 180 nt1.9□□□□□ -2.11
UFD1P53044 OST2YOR103C 393 nt1.9□□□□□ -2.11
UFD1P53044 YPL034WYPL034W 498 nt1.9□□□□□ -2.11
UFD1P53044 KOG1YHR186C 4674 nt1.9□□□□□ -2.11
UFD1P53044 YMR045CYMR045C 5268 nt1.9□□□□□ -2.11
UFD1P53044 YDR199WYDR199W 366 nt1.89□□□□□ -2.11
UFD1P53044 TMA20YER007C-A 546 nt1.89□□□□□ -2.11
UFD1P53044 YER119C-AYER119C-A 372 nt1.89□□□□□ -2.11
UFD1P53044 YGR228WYGR228W 345 nt1.89□□□□□ -2.11
UFD1P53044 PRS3YHL011C 963 nt1.89□□□□□ -2.11
UFD1P53044 UTP30YKR060W 825 nt1.89□□□□□ -2.11
UFD1P53044 TAP42YMR028W 1101 nt1.89□□□□□ -2.11
UFD1P53044 SWM2YNR004W 441 nt1.89□□□□□ -2.11
UFD1P53044 YHR214C-BYHR214C-B 5382 nt1.89□□□□□ -2.11
UFD1P53044 REV3YPL167C 4515 nt1.89□□□□□ -2.11
UFD1P53044 RRI2YOL117W 1938 nt1.89□□□□□ -2.11
UFD1P53044 LEU3YLR451W 2661 nt1.89□□□□□ -2.11
UFD1P53044 GAL80YML051W 1308 nt1.89□□□□□ -2.11
UFD1P53044 SNU114YKL173W 3027 nt1.88□□□□□ -2.11
UFD1P53044 YGL042CYGL042C 306 nt1.88□□□□□ -2.11
UFD1P53044 YLR302CYLR302C 363 nt1.88□□□□□ -2.11
UFD1P53044 YMR320WYMR320W 306 nt1.88□□□□□ -2.11
UFD1P53044 HHT2YNL031C 411 nt1.88□□□□□ -2.11
UFD1P53044 TRM7YBR061C 933 nt1.88□□□□□ -2.11
UFD1P53044 NSL1YPL233W 651 nt1.88□□□□□ -2.11
UFD1P53044 NEO1YIL048W 3456 nt1.88□□□□□ -2.11
UFD1P53044 BRE1YDL074C 2103 nt1.88□□□□□ -2.11
UFD1P53044 YNL034WYNL034W 1839 nt1.87□□□□□ -2.11
UFD1P53044 YCR108CYCR108C 192 nt1.87□□□□□ -2.11
UFD1P53044 IRC2YDR112W 309 nt1.87□□□□□ -2.11
UFD1P53044 SLX9YGR081C 633 nt1.87□□□□□ -2.11
UFD1P53044 DFG10YIL049W 762 nt1.87□□□□□ -2.11
UFD1P53044 YJL202CYJL202C 348 nt1.87□□□□□ -2.11
UFD1P53044 CSE4YKL049C 690 nt1.87□□□□□ -2.11
UFD1P53044 ATG38YLR211C 681 nt1.87□□□□□ -2.11
UFD1P53044 YNL179CYNL179C 438 nt1.87□□□□□ -2.11
UFD1P53044 CRS5YOR031W 210 nt1.87□□□□□ -2.11
UFD1P53044 RGL1YPL066W 1440 nt1.87□□□□□ -2.11
UFD1P53044 ECM5YMR176W 4236 nt1.87□□□□□ -2.11
UFD1P53044 FKS1YLR342W 5631 nt1.87□□□□□ -2.11
UFD1P53044 INP51YIL002C 2841 nt1.86□□□□□ -2.11
UFD1P53044 GDI1YER136W 1356 nt1.86□□□□□ -2.11
UFD1P53044 AAD16YFL057C 459 nt1.86□□□□□ -2.11
UFD1P53044 RNP1YLL046C 750 nt1.86□□□□□ -2.11
UFD1P53044 HRI1YLR301W 735 nt1.86□□□□□ -2.11
UFD1P53044 LSM2YBL026W 288 nt1.86□□□□□ -2.11
UFD1P53044 DGR1YNL130C-A 147 nt1.86□□□□□ -2.11
UFD1P53044 RIO2YNL207W 1278 nt1.86□□□□□ -2.11
UFD1P53044 STD1YOR047C 1335 nt1.86□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 60.5 ms