Protein–RNA interactions for Protein: P11586

MTHFD1, C-1-tetrahydrofolate synthase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1P11586 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.26■□□□□ 0.83
MTHFD1P11586 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
MTHFD1P11586 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MTHFD1P11586 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.26■□□□□ 0.83
MTHFD1P11586 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MTHFD1P11586 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MTHFD1P11586 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
MTHFD1P11586 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
MTHFD1P11586 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MTHFD1P11586 HLA-L-209ENST00000420110 1011 ntBASIC20.26■□□□□ 0.83
MTHFD1P11586 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.26■□□□□ 0.83
MTHFD1P11586 AC091799.1-201ENST00000422823 811 ntBASIC20.26■□□□□ 0.83
MTHFD1P11586 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.26■□□□□ 0.83
MTHFD1P11586 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.26■□□□□ 0.83
MTHFD1P11586 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
MTHFD1P11586 AL162412.1-201ENST00000567129 965 ntBASIC20.26■□□□□ 0.83
MTHFD1P11586 AL121832.2-201ENST00000610979 668 ntBASIC20.26■□□□□ 0.83
MTHFD1P11586 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.26■□□□□ 0.83
MTHFD1P11586 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.26■□□□□ 0.83
MTHFD1P11586 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MTHFD1P11586 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.26■□□□□ 0.83
MTHFD1P11586 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MTHFD1P11586 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
MTHFD1P11586 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MTHFD1P11586 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.26■□□□□ 0.83
MTHFD1P11586 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MTHFD1P11586 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MTHFD1P11586 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
MTHFD1P11586 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MTHFD1P11586 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.25■□□□□ 0.83
MTHFD1P11586 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
MTHFD1P11586 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MTHFD1P11586 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.25■□□□□ 0.83
MTHFD1P11586 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MTHFD1P11586 GPX1P1-201ENST00000388829 606 ntBASIC20.25■□□□□ 0.83
MTHFD1P11586 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
MTHFD1P11586 AC133552.2-202ENST00000575694 574 ntBASIC20.25■□□□□ 0.83
MTHFD1P11586 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.25■□□□□ 0.83
MTHFD1P11586 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
MTHFD1P11586 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MTHFD1P11586 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MTHFD1P11586 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.25■□□□□ 0.83
MTHFD1P11586 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MTHFD1P11586 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
MTHFD1P11586 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MTHFD1P11586 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
MTHFD1P11586 LINC01521-201ENST00000504184 1943 ntBASIC20.25■□□□□ 0.83
MTHFD1P11586 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
MTHFD1P11586 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MTHFD1P11586 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
MTHFD1P11586 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MTHFD1P11586 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
MTHFD1P11586 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.24■□□□□ 0.83
MTHFD1P11586 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
MTHFD1P11586 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.24■□□□□ 0.83
MTHFD1P11586 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.24■□□□□ 0.83
MTHFD1P11586 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.24■□□□□ 0.83
MTHFD1P11586 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.24■□□□□ 0.83
MTHFD1P11586 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
MTHFD1P11586 AC069236.1-201ENST00000604339 616 ntBASIC20.24■□□□□ 0.83
MTHFD1P11586 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MTHFD1P11586 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
MTHFD1P11586 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MTHFD1P11586 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MTHFD1P11586 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MTHFD1P11586 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
MTHFD1P11586 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.23■□□□□ 0.83
MTHFD1P11586 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
MTHFD1P11586 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
MTHFD1P11586 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.23■□□□□ 0.83
MTHFD1P11586 AC083906.2-201ENST00000511578 360 ntBASIC20.23■□□□□ 0.83
MTHFD1P11586 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.23■□□□□ 0.83
MTHFD1P11586 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MTHFD1P11586 AC104771.1-201ENST00000603335 964 ntBASIC20.23■□□□□ 0.83
MTHFD1P11586 AL109923.1-201ENST00000618799 583 ntBASIC20.23■□□□□ 0.83
MTHFD1P11586 AC008694.1-202ENST00000636953 945 ntBASIC20.23■□□□□ 0.83
MTHFD1P11586 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.23■□□□□ 0.83
MTHFD1P11586 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
MTHFD1P11586 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
MTHFD1P11586 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
MTHFD1P11586 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
MTHFD1P11586 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.22■□□□□ 0.83
MTHFD1P11586 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFD1P11586 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFD1P11586 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFD1P11586 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFD1P11586 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFD1P11586 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFD1P11586 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
MTHFD1P11586 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFD1P11586 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFD1P11586 AF201337.1-201ENST00000520239 748 ntBASIC20.22■□□□□ 0.83
MTHFD1P11586 OR10C1-204ENST00000622521 1039 ntBASIC20.22■□□□□ 0.83
MTHFD1P11586 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
MTHFD1P11586 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
MTHFD1P11586 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFD1P11586 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFD1P11586 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFD1P11586 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
MTHFD1P11586 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms