Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
Trav10A0A075B642 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.14
Trav10A0A075B642 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav10A0A075B642 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav10A0A075B642 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav10A0A075B642 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav10A0A075B642 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav10A0A075B642 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav10A0A075B642 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav10A0A075B642 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trav10A0A075B642 Gm43859-201ENSMUST00000200075 1412 ntBASIC15.89■□□□□ 0.13
Trav10A0A075B642 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav10A0A075B642 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.89■□□□□ 0.13
Trav10A0A075B642 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.89■□□□□ 0.13
Trav10A0A075B642 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.89■□□□□ 0.13
Trav10A0A075B642 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav10A0A075B642 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav10A0A075B642 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav10A0A075B642 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav10A0A075B642 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav10A0A075B642 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav10A0A075B642 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
Trav10A0A075B642 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav10A0A075B642 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trav10A0A075B642 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav10A0A075B642 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav10A0A075B642 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav10A0A075B642 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav10A0A075B642 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav10A0A075B642 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav10A0A075B642 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav10A0A075B642 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav10A0A075B642 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav10A0A075B642 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav10A0A075B642 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav10A0A075B642 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Trav10A0A075B642 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav10A0A075B642 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav10A0A075B642 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav10A0A075B642 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav10A0A075B642 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav10A0A075B642 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav10A0A075B642 Gm2399-201ENSMUST00000104944 225 ntBASIC15.87■□□□□ 0.13
Trav10A0A075B642 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav10A0A075B642 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Trav10A0A075B642 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav10A0A075B642 Gm44549-201ENSMUST00000208351 577 ntBASIC15.87■□□□□ 0.13
Trav10A0A075B642 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav10A0A075B642 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav10A0A075B642 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav10A0A075B642 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav10A0A075B642 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav10A0A075B642 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav10A0A075B642 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav10A0A075B642 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.87■□□□□ 0.13
Trav10A0A075B642 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav10A0A075B642 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav10A0A075B642 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav10A0A075B642 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav10A0A075B642 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav10A0A075B642 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trav10A0A075B642 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav10A0A075B642 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav10A0A075B642 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav10A0A075B642 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav10A0A075B642 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.86■□□□□ 0.13
Trav10A0A075B642 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.86■□□□□ 0.13
Trav10A0A075B642 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav10A0A075B642 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trav10A0A075B642 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.86■□□□□ 0.13
Trav10A0A075B642 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.86■□□□□ 0.13
Trav10A0A075B642 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav10A0A075B642 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trav10A0A075B642 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav10A0A075B642 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav10A0A075B642 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.86■□□□□ 0.13
Trav10A0A075B642 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav10A0A075B642 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav10A0A075B642 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav10A0A075B642 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav10A0A075B642 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav10A0A075B642 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trav10A0A075B642 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav10A0A075B642 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav10A0A075B642 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav10A0A075B642 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav10A0A075B642 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
Trav10A0A075B642 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav10A0A075B642 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trav10A0A075B642 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav10A0A075B642 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav10A0A075B642 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav10A0A075B642 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.85■□□□□ 0.13
Trav10A0A075B642 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav10A0A075B642 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav10A0A075B642 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.85■□□□□ 0.13
Trav10A0A075B642 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav10A0A075B642 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav10A0A075B642 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav10A0A075B642 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms