Protein–RNA interactions for Protein: Q8VE18

Smg8, Protein SMG8, mousemouse

Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg8Q8VE18 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smg8Q8VE18 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smg8Q8VE18 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.16■□□□□ 0.66
Smg8Q8VE18 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smg8Q8VE18 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smg8Q8VE18 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.15■□□□□ 0.66
Smg8Q8VE18 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smg8Q8VE18 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smg8Q8VE18 Gm9987-201ENSMUST00000069768 567 ntBASIC19.15■□□□□ 0.66
Smg8Q8VE18 Golph3-205ENSMUST00000228671 2842 ntBASIC19.15■□□□□ 0.66
Smg8Q8VE18 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smg8Q8VE18 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smg8Q8VE18 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smg8Q8VE18 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smg8Q8VE18 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smg8Q8VE18 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smg8Q8VE18 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smg8Q8VE18 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smg8Q8VE18 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smg8Q8VE18 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smg8Q8VE18 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smg8Q8VE18 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smg8Q8VE18 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smg8Q8VE18 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smg8Q8VE18 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smg8Q8VE18 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smg8Q8VE18 Gm3375-201ENSMUST00000203929 796 ntBASIC19.14■□□□□ 0.65
Smg8Q8VE18 Timm23-208ENSMUST00000226683 750 ntBASIC19.14■□□□□ 0.65
Smg8Q8VE18 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Smg8Q8VE18 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Smg8Q8VE18 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smg8Q8VE18 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smg8Q8VE18 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smg8Q8VE18 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smg8Q8VE18 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smg8Q8VE18 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.13■□□□□ 0.65
Smg8Q8VE18 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smg8Q8VE18 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.13■□□□□ 0.65
Smg8Q8VE18 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smg8Q8VE18 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Smg8Q8VE18 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smg8Q8VE18 Tgds-204ENSMUST00000228543 1594 ntBASIC19.13■□□□□ 0.65
Smg8Q8VE18 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smg8Q8VE18 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smg8Q8VE18 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smg8Q8VE18 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smg8Q8VE18 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smg8Q8VE18 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smg8Q8VE18 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smg8Q8VE18 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smg8Q8VE18 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smg8Q8VE18 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smg8Q8VE18 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smg8Q8VE18 Gm30025-201ENSMUST00000218555 728 ntBASIC19.12■□□□□ 0.65
Smg8Q8VE18 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Smg8Q8VE18 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smg8Q8VE18 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smg8Q8VE18 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smg8Q8VE18 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Smg8Q8VE18 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.11■□□□□ 0.65
Smg8Q8VE18 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Smg8Q8VE18 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smg8Q8VE18 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Smg8Q8VE18 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smg8Q8VE18 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Smg8Q8VE18 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Smg8Q8VE18 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smg8Q8VE18 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Smg8Q8VE18 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smg8Q8VE18 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smg8Q8VE18 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Smg8Q8VE18 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smg8Q8VE18 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smg8Q8VE18 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.1■□□□□ 0.65
Smg8Q8VE18 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smg8Q8VE18 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Smg8Q8VE18 Gm6433-201ENSMUST00000118634 875 ntBASIC19.1■□□□□ 0.65
Smg8Q8VE18 Gm11643-201ENSMUST00000119578 864 ntBASIC19.1■□□□□ 0.65
Smg8Q8VE18 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smg8Q8VE18 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smg8Q8VE18 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smg8Q8VE18 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Smg8Q8VE18 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smg8Q8VE18 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.1■□□□□ 0.65
Smg8Q8VE18 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.1■□□□□ 0.65
Smg8Q8VE18 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smg8Q8VE18 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Smg8Q8VE18 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Smg8Q8VE18 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smg8Q8VE18 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smg8Q8VE18 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
Smg8Q8VE18 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Smg8Q8VE18 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Smg8Q8VE18 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.09■□□□□ 0.65
Smg8Q8VE18 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Smg8Q8VE18 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.09■□□□□ 0.65
Smg8Q8VE18 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smg8Q8VE18 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smg8Q8VE18 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smg8Q8VE18 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms