Protein–RNA interactions for Protein: Q78XR0

Trappc6a, Trafficking protein particle complex subunit 6A, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6aQ78XR0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.81■□□□□ 0.44
Trappc6aQ78XR0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trappc6aQ78XR0 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.8■□□□□ 0.44
Trappc6aQ78XR0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trappc6aQ78XR0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.8■□□□□ 0.44
Trappc6aQ78XR0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trappc6aQ78XR0 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trappc6aQ78XR0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trappc6aQ78XR0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trappc6aQ78XR0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trappc6aQ78XR0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trappc6aQ78XR0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trappc6aQ78XR0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trappc6aQ78XR0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.8■□□□□ 0.44
Trappc6aQ78XR0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trappc6aQ78XR0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trappc6aQ78XR0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trappc6aQ78XR0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trappc6aQ78XR0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trappc6aQ78XR0 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trappc6aQ78XR0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.79■□□□□ 0.44
Trappc6aQ78XR0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Trappc6aQ78XR0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trappc6aQ78XR0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.79■□□□□ 0.44
Trappc6aQ78XR0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trappc6aQ78XR0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trappc6aQ78XR0 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trappc6aQ78XR0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trappc6aQ78XR0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trappc6aQ78XR0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Trappc6aQ78XR0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trappc6aQ78XR0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trappc6aQ78XR0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trappc6aQ78XR0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trappc6aQ78XR0 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trappc6aQ78XR0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trappc6aQ78XR0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trappc6aQ78XR0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trappc6aQ78XR0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trappc6aQ78XR0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trappc6aQ78XR0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trappc6aQ78XR0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Trappc6aQ78XR0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trappc6aQ78XR0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trappc6aQ78XR0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Trappc6aQ78XR0 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trappc6aQ78XR0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trappc6aQ78XR0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trappc6aQ78XR0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.77■□□□□ 0.44
Trappc6aQ78XR0 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trappc6aQ78XR0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trappc6aQ78XR0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Trappc6aQ78XR0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.43
Trappc6aQ78XR0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trappc6aQ78XR0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Trappc6aQ78XR0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trappc6aQ78XR0 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trappc6aQ78XR0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trappc6aQ78XR0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trappc6aQ78XR0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.76■□□□□ 0.43
Trappc6aQ78XR0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trappc6aQ78XR0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.76■□□□□ 0.43
Trappc6aQ78XR0 Gm27463-201ENSMUST00000183569 57 ntBASIC17.76■□□□□ 0.43
Trappc6aQ78XR0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Trappc6aQ78XR0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Trappc6aQ78XR0 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Trappc6aQ78XR0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Trappc6aQ78XR0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trappc6aQ78XR0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trappc6aQ78XR0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trappc6aQ78XR0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trappc6aQ78XR0 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.75■□□□□ 0.43
Trappc6aQ78XR0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trappc6aQ78XR0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.75■□□□□ 0.43
Trappc6aQ78XR0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trappc6aQ78XR0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trappc6aQ78XR0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trappc6aQ78XR0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trappc6aQ78XR0 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trappc6aQ78XR0 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trappc6aQ78XR0 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trappc6aQ78XR0 Gm10517-202ENSMUST00000192970 758 ntBASIC17.74■□□□□ 0.43
Trappc6aQ78XR0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.74■□□□□ 0.43
Trappc6aQ78XR0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trappc6aQ78XR0 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.74■□□□□ 0.43
Trappc6aQ78XR0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trappc6aQ78XR0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.74■□□□□ 0.43
Trappc6aQ78XR0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trappc6aQ78XR0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trappc6aQ78XR0 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.74■□□□□ 0.43
Trappc6aQ78XR0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trappc6aQ78XR0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trappc6aQ78XR0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trappc6aQ78XR0 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trappc6aQ78XR0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trappc6aQ78XR0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trappc6aQ78XR0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trappc6aQ78XR0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trappc6aQ78XR0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
Trappc6aQ78XR0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms