Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Foxd1Q61345 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Foxd1Q61345 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Foxd1Q61345 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Foxd1Q61345 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Foxd1Q61345 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Foxd1Q61345 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Foxd1Q61345 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Foxd1Q61345 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Foxd1Q61345 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Foxd1Q61345 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Foxd1Q61345 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Foxd1Q61345 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Foxd1Q61345 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Foxd1Q61345 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Foxd1Q61345 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Foxd1Q61345 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Foxd1Q61345 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Foxd1Q61345 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Foxd1Q61345 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Foxd1Q61345 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Foxd1Q61345 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.72■□□□□ 0.91
Foxd1Q61345 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Foxd1Q61345 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Foxd1Q61345 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Foxd1Q61345 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.71■□□□□ 0.91
Foxd1Q61345 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Foxd1Q61345 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Foxd1Q61345 Mir5130-201ENSMUST00000175160 84 ntBASIC20.71■□□□□ 0.91
Foxd1Q61345 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Foxd1Q61345 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Foxd1Q61345 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Foxd1Q61345 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Foxd1Q61345 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC20.71■□□□□ 0.91
Foxd1Q61345 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Foxd1Q61345 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Foxd1Q61345 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Foxd1Q61345 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Foxd1Q61345 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.7■□□□□ 0.91
Foxd1Q61345 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Foxd1Q61345 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Foxd1Q61345 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Foxd1Q61345 Gm22697-201ENSMUST00000175194 63 ntBASIC20.7■□□□□ 0.9
Foxd1Q61345 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC20.7■□□□□ 0.9
Foxd1Q61345 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Foxd1Q61345 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Foxd1Q61345 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.7■□□□□ 0.9
Foxd1Q61345 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Foxd1Q61345 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Foxd1Q61345 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.7■□□□□ 0.9
Foxd1Q61345 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Foxd1Q61345 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Foxd1Q61345 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Foxd1Q61345 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Foxd1Q61345 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Foxd1Q61345 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Foxd1Q61345 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.69■□□□□ 0.9
Foxd1Q61345 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Foxd1Q61345 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC20.69■□□□□ 0.9
Foxd1Q61345 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Foxd1Q61345 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Foxd1Q61345 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC20.69■□□□□ 0.9
Foxd1Q61345 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Foxd1Q61345 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Foxd1Q61345 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
Foxd1Q61345 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Foxd1Q61345 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Foxd1Q61345 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.69■□□□□ 0.9
Foxd1Q61345 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Foxd1Q61345 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Foxd1Q61345 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Foxd1Q61345 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Foxd1Q61345 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Foxd1Q61345 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Foxd1Q61345 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Foxd1Q61345 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Foxd1Q61345 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Foxd1Q61345 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Foxd1Q61345 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Foxd1Q61345 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Foxd1Q61345 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Foxd1Q61345 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Foxd1Q61345 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Foxd1Q61345 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.67■□□□□ 0.9
Foxd1Q61345 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Foxd1Q61345 AC154621.1-201ENSMUST00000226155 1119 ntBASIC20.67■□□□□ 0.9
Foxd1Q61345 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Foxd1Q61345 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Foxd1Q61345 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.67■□□□□ 0.9
Foxd1Q61345 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Foxd1Q61345 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Foxd1Q61345 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Foxd1Q61345 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Foxd1Q61345 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Foxd1Q61345 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Foxd1Q61345 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Foxd1Q61345 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Foxd1Q61345 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Foxd1Q61345 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Foxd1Q61345 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms