Protein–RNA interactions for Protein: Q08723

RPN8, 26S proteasome regulatory subunit RPN8, yeastyeast

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN8Q08723 VPS13YLL040C 9435 nt2.23□□□□□ -2.05
RPN8Q08723 SEC16YPL085W 6588 nt2.23□□□□□ -2.05
RPN8Q08723 YIL080WYIL080W 4722 nt2.23□□□□□ -2.05
RPN8Q08723 snR5snR5 204 nt2.23□□□□□ -2.05
RPN8Q08723 YDR115WYDR115W 318 nt2.23□□□□□ -2.05
RPN8Q08723 YFR009W-AYFR009W-A 258 nt2.23□□□□□ -2.05
RPN8Q08723 YHR180W-AYHR180W-A 183 nt2.23□□□□□ -2.05
RPN8Q08723 MRP49YKL167C 414 nt2.23□□□□□ -2.05
RPN8Q08723 COX8YLR395C 237 nt2.23□□□□□ -2.05
RPN8Q08723 YNR034W-AYNR034W-A 297 nt2.23□□□□□ -2.05
RPN8Q08723 FIR1YER032W 2631 nt2.23□□□□□ -2.05
RPN8Q08723 DUG2YBR281C 2637 nt2.23□□□□□ -2.05
RPN8Q08723 TRZ1YKR079C 2517 nt2.23□□□□□ -2.05
RPN8Q08723 YKL075CYKL075C 1353 nt2.23□□□□□ -2.05
RPN8Q08723 RGA1YOR127W 3024 nt2.22□□□□□ -2.05
RPN8Q08723 SNO3YFL060C 669 nt2.22□□□□□ -2.05
RPN8Q08723 PET191YJR034W 327 nt2.22□□□□□ -2.05
RPN8Q08723 SNO2YNL334C 669 nt2.22□□□□□ -2.05
RPN8Q08723 RSA1YPL193W 1146 nt2.22□□□□□ -2.05
RPN8Q08723 BFR1YOR198C 1413 nt2.22□□□□□ -2.05
RPN8Q08723 UBX3YDL091C 1368 nt2.22□□□□□ -2.05
RPN8Q08723 YDL158CYDL158C 309 nt2.21□□□□□ -2.06
RPN8Q08723 MND1YGL183C 660 nt2.21□□□□□ -2.06
RPN8Q08723 YAL042C-AYAL042C-A 378 nt2.21□□□□□ -2.06
RPN8Q08723 NYV1YLR093C 762 nt2.21□□□□□ -2.06
RPN8Q08723 IRC21YMR073C 606 nt2.21□□□□□ -2.06
RPN8Q08723 ESF2YNR054C 951 nt2.21□□□□□ -2.06
RPN8Q08723 ISU1YPL135W 498 nt2.21□□□□□ -2.06
RPN8Q08723 ALG14YBR070C 714 nt2.21□□□□□ -2.06
RPN8Q08723 NCS2YNL119W 1482 nt2.2□□□□□ -2.06
RPN8Q08723 MSB1YOR188W 3414 nt2.2□□□□□ -2.06
RPN8Q08723 SAP185YJL098W 3177 nt2.2□□□□□ -2.06
RPN8Q08723 RPS24AYER074W 408 nt2.2□□□□□ -2.06
RPN8Q08723 YER107W-AYER107W-A 321 nt2.2□□□□□ -2.06
RPN8Q08723 AIM19YIL087C 474 nt2.2□□□□□ -2.06
RPN8Q08723 YJL119CYJL119C 324 nt2.2□□□□□ -2.06
RPN8Q08723 VPS63YLR261C 327 nt2.2□□□□□ -2.06
RPN8Q08723 PDP3YLR455W 915 nt2.2□□□□□ -2.06
RPN8Q08723 AIM32YML050W 936 nt2.2□□□□□ -2.06
RPN8Q08723 YMR254CYMR254C 309 nt2.2□□□□□ -2.06
RPN8Q08723 YOL085W-AYOL085W-A 213 nt2.2□□□□□ -2.06
RPN8Q08723 KOG1YHR186C 4674 nt2.2□□□□□ -2.06
RPN8Q08723 SWA2YDR320C 2007 nt2.2□□□□□ -2.06
RPN8Q08723 APM3YBR288C 1452 nt2.2□□□□□ -2.06
RPN8Q08723 YOR093CYOR093C 4947 nt2.2□□□□□ -2.06
RPN8Q08723 SPP41YDR464W 4308 nt2.19□□□□□ -2.06
RPN8Q08723 SCY1YGL083W 2415 nt2.19□□□□□ -2.06
RPN8Q08723 SPB1YCL054W 2526 nt2.19□□□□□ -2.06
RPN8Q08723 TDA2YER071C 381 nt2.19□□□□□ -2.06
RPN8Q08723 YKL123WYKL123W 381 nt2.19□□□□□ -2.06
RPN8Q08723 YMR173W-AYMR173W-A 1185 nt2.19□□□□□ -2.06
RPN8Q08723 YPR170CYPR170C 336 nt2.19□□□□□ -2.06
RPN8Q08723 NEL1YHR035W 1893 nt2.19□□□□□ -2.06
RPN8Q08723 MFB1YDR219C 1398 nt2.19□□□□□ -2.06
RPN8Q08723 SAP190YKR028W 3102 nt2.19□□□□□ -2.06
RPN8Q08723 TRM2YKR056W 1920 nt2.19□□□□□ -2.06
RPN8Q08723 MPO1YGL010W 525 nt2.18□□□□□ -2.06
RPN8Q08723 YOL159C-AYOL159C-A 273 nt2.18□□□□□ -2.06
RPN8Q08723 PEP12YOR036W 867 nt2.18□□□□□ -2.06
RPN8Q08723 YOR152CYOR152C 771 nt2.18□□□□□ -2.06
RPN8Q08723 RRG8YPR116W 834 nt2.18□□□□□ -2.06
RPN8Q08723 MSS18YPR134W 807 nt2.18□□□□□ -2.06
RPN8Q08723 YCL007CYCL007C 393 nt2.18□□□□□ -2.06
RPN8Q08723 SCH9YHR205W 2475 nt2.18□□□□□ -2.06
RPN8Q08723 APC2YLR127C 2562 nt2.18□□□□□ -2.06
RPN8Q08723 GIS1YDR096W 2685 nt2.17□□□□□ -2.06
RPN8Q08723 AFI1YOR129C 2682 nt2.17□□□□□ -2.06
RPN8Q08723 COG3YER157W 2406 nt2.17□□□□□ -2.06
RPN8Q08723 GPI8YDR331W 1236 nt2.17□□□□□ -2.06
RPN8Q08723 TIF35YDR429C 825 nt2.17□□□□□ -2.06
RPN8Q08723 TIM9YEL020W-A 264 nt2.17□□□□□ -2.06
RPN8Q08723 ERV1YGR029W 570 nt2.17□□□□□ -2.06
RPN8Q08723 PRP38YGR075C 729 nt2.17□□□□□ -2.06
RPN8Q08723 YIL068W-AYIL068W-A 384 nt2.17□□□□□ -2.06
RPN8Q08723 YLR224WYLR224W 1110 nt2.17□□□□□ -2.06
RPN8Q08723 YNL046WYNL046W 519 nt2.17□□□□□ -2.06
RPN8Q08723 YNR021WYNR021W 1215 nt2.17□□□□□ -2.06
RPN8Q08723 YOR169CYOR169C 465 nt2.17□□□□□ -2.06
RPN8Q08723 ARL3YPL051W 597 nt2.17□□□□□ -2.06
RPN8Q08723 KAR9YPL269W 1935 nt2.17□□□□□ -2.06
RPN8Q08723 TFC3YAL001C 3483 nt2.16□□□□□ -2.06
RPN8Q08723 YDR179W-AYDR179W-A 1392 nt2.16□□□□□ -2.06
RPN8Q08723 KSP1YHR082C 3090 nt2.16□□□□□ -2.06
RPN8Q08723 NCB2YDR397C 441 nt2.16□□□□□ -2.06
RPN8Q08723 YMR31YFR049W 372 nt2.16□□□□□ -2.06
RPN8Q08723 YGR226CYGR226C 210 nt2.16□□□□□ -2.06
RPN8Q08723 AIM18YHR198C 966 nt2.16□□□□□ -2.06
RPN8Q08723 SRP21YKL122C 504 nt2.16□□□□□ -2.06
RPN8Q08723 VPS51YKR020W 495 nt2.16□□□□□ -2.06
RPN8Q08723 YOL134CYOL134C 390 nt2.16□□□□□ -2.06
RPN8Q08723 TAZ1YPR140W 1146 nt2.16□□□□□ -2.06
RPN8Q08723 PUF4YGL014W 2667 nt2.16□□□□□ -2.06
RPN8Q08723 GCV2YMR189W 3105 nt2.16□□□□□ -2.06
RPN8Q08723 DAL5YJR152W 1632 nt2.16□□□□□ -2.06
RPN8Q08723 FUS1YCL027W 1539 nt2.16□□□□□ -2.06
RPN8Q08723 PEX8YGR077C 1770 nt2.15□□□□□ -2.06
RPN8Q08723 EDS1YBR033W 2760 nt2.15□□□□□ -2.06
RPN8Q08723 YPR097WYPR097W 3222 nt2.15□□□□□ -2.06
RPN8Q08723 YHR214C-BYHR214C-B 5382 nt2.15□□□□□ -2.07
RPN8Q08723 snR59snR59 78 nt2.15□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 108.5 ms