Protein–RNA interactions for Protein: Q03308

VPS16, Vacuolar protein sorting-associated protein 16, yeastyeast

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS16Q03308 SHH3YMR118C 591 nt3.73□□□□□ -1.81
VPS16Q03308 MRPL50YNR022C 420 nt3.73□□□□□ -1.81
VPS16Q03308 YOR121CYOR121C 306 nt3.73□□□□□ -1.81
VPS16Q03308 FMP23YBR047W 528 nt3.73□□□□□ -1.81
VPS16Q03308 YPL225WYPL225W 441 nt3.73□□□□□ -1.81
VPS16Q03308 RIX1YHR197W 2292 nt3.73□□□□□ -1.81
VPS16Q03308 TOM70YNL121C 1854 nt3.73□□□□□ -1.81
VPS16Q03308 SMC3YJL074C 3693 nt3.73□□□□□ -1.81
VPS16Q03308 LEU3YLR451W 2661 nt3.72□□□□□ -1.81
VPS16Q03308 CDC50YCR094W 1176 nt3.72□□□□□ -1.81
VPS16Q03308 YER076W-AYER076W-A 348 nt3.72□□□□□ -1.81
VPS16Q03308 YGR035CYGR035C 351 nt3.72□□□□□ -1.81
VPS16Q03308 RPC10YHR143W-A 213 nt3.72□□□□□ -1.81
VPS16Q03308 YMR141CYMR141C 309 nt3.72□□□□□ -1.81
VPS16Q03308 SSN8YNL025C 972 nt3.72□□□□□ -1.81
VPS16Q03308 PEP12YOR036W 867 nt3.72□□□□□ -1.81
VPS16Q03308 FAR1YJL157C 2493 nt3.72□□□□□ -1.81
VPS16Q03308 SNT1YCR033W 3681 nt3.72□□□□□ -1.81
VPS16Q03308 BOI1YBL085W 2943 nt3.72□□□□□ -1.81
VPS16Q03308 COG3YER157W 2406 nt3.72□□□□□ -1.81
VPS16Q03308 DIE2YGR227W 1578 nt3.72□□□□□ -1.81
VPS16Q03308 MET10YFR030W 3108 nt3.71□□□□□ -1.82
VPS16Q03308 FUS1YCL027W 1539 nt3.71□□□□□ -1.82
VPS16Q03308 YER137W-AYER137W-A 306 nt3.71□□□□□ -1.82
VPS16Q03308 YHR032C-AYHR032C-A 120 nt3.71□□□□□ -1.82
VPS16Q03308 CGI121YML036W 546 nt3.71□□□□□ -1.82
VPS16Q03308 ICY1YMR195W 384 nt3.71□□□□□ -1.82
VPS16Q03308 YNL043CYNL043C 321 nt3.71□□□□□ -1.82
VPS16Q03308 RPS7BYNL096C 573 nt3.71□□□□□ -1.82
VPS16Q03308 SWM2YNR004W 441 nt3.71□□□□□ -1.82
VPS16Q03308 CDC45YLR103C 1953 nt3.71□□□□□ -1.82
VPS16Q03308 BMS1YPL217C 3552 nt3.71□□□□□ -1.82
VPS16Q03308 TCB3YML072C 4638 nt3.71□□□□□ -1.82
VPS16Q03308 MKT1YNL085W 2493 nt3.7□□□□□ -1.82
VPS16Q03308 YMR31YFR049W 372 nt3.7□□□□□ -1.82
VPS16Q03308 SOD1YJR104C 465 nt3.7□□□□□ -1.82
VPS16Q03308 RDS1YCR106W 2499 nt3.7□□□□□ -1.82
VPS16Q03308 SSY1YDR160W 2559 nt3.7□□□□□ -1.82
VPS16Q03308 IOC3YFR013W 2364 nt3.69□□□□□ -1.82
VPS16Q03308 STE23YLR389C 3084 nt3.69□□□□□ -1.82
VPS16Q03308 RPS17BYDR447C 411 nt3.69□□□□□ -1.82
VPS16Q03308 YER188C-AYER188C-A 300 nt3.69□□□□□ -1.82
VPS16Q03308 YOR192C-CYOR192C-C 237 nt3.69□□□□□ -1.82
VPS16Q03308 YPR108W-AYPR108W-A 213 nt3.69□□□□□ -1.82
VPS16Q03308 SEA4YBL104C 3117 nt3.68□□□□□ -1.82
VPS16Q03308 MSR1YHR091C 1932 nt3.68□□□□□ -1.82
VPS16Q03308 YDL242WYDL242W 354 nt3.68□□□□□ -1.82
VPS16Q03308 BMH2YDR099W 822 nt3.68□□□□□ -1.82
VPS16Q03308 YDR464C-AYDR464C-A 189 nt3.68□□□□□ -1.82
VPS16Q03308 PET191YJR034W 327 nt3.68□□□□□ -1.82
VPS16Q03308 YKL162C-AYKL162C-A 153 nt3.68□□□□□ -1.82
VPS16Q03308 YML009C-AYML009C-A 327 nt3.68□□□□□ -1.82
VPS16Q03308 RPL19BYBL027W 570 nt3.68□□□□□ -1.82
VPS16Q03308 UBC7YMR022W 498 nt3.68□□□□□ -1.82
VPS16Q03308 RPS8AYBL072C 603 nt3.68□□□□□ -1.82
VPS16Q03308 ESF2YNR054C 951 nt3.68□□□□□ -1.82
VPS16Q03308 SPA2YLL021W 4401 nt3.68□□□□□ -1.82
VPS16Q03308 KAP95YLR347C 2586 nt3.68□□□□□ -1.82
VPS16Q03308 AYT1YLL063C 1425 nt3.68□□□□□ -1.82
VPS16Q03308 GCD10YNL062C 1437 nt3.68□□□□□ -1.82
VPS16Q03308 NDD1YOR372C 1665 nt3.68□□□□□ -1.82
VPS16Q03308 AI2Q0055 2565 nt3.67□□□□□ -1.82
VPS16Q03308 YJR098CYJR098C 1971 nt3.67□□□□□ -1.82
VPS16Q03308 ECM5YMR176W 4236 nt3.67□□□□□ -1.82
VPS16Q03308 YDL068WYDL068W 330 nt3.67□□□□□ -1.82
VPS16Q03308 YDR133CYDR133C 336 nt3.67□□□□□ -1.82
VPS16Q03308 YFL065CYFL065C 309 nt3.67□□□□□ -1.82
VPS16Q03308 UNG1YML021C 1080 nt3.67□□□□□ -1.82
VPS16Q03308 YOR146WYOR146W 306 nt3.67□□□□□ -1.82
VPS16Q03308 YPL038W-AYPL038W-A 192 nt3.67□□□□□ -1.82
VPS16Q03308 YNL034WYNL034W 1839 nt3.67□□□□□ -1.82
VPS16Q03308 DNM1YLL001W 2274 nt3.67□□□□□ -1.82
VPS16Q03308 SPB1YCL054W 2526 nt3.66□□□□□ -1.82
VPS16Q03308 SGN1YIR001C 753 nt3.66□□□□□ -1.82
VPS16Q03308 YPR016W-AYPR016W-A 261 nt3.66□□□□□ -1.82
VPS16Q03308 ENA5YDR038C 3276 nt3.66□□□□□ -1.82
VPS16Q03308 ENA2YDR039C 3276 nt3.66□□□□□ -1.82
VPS16Q03308 ENA1YDR040C 3276 nt3.66□□□□□ -1.82
VPS16Q03308 SLA1YBL007C 3735 nt3.66□□□□□ -1.82
VPS16Q03308 RLF2YPR018W 1821 nt3.65□□□□□ -1.82
VPS16Q03308 SPC72YAL047C 1869 nt3.65□□□□□ -1.82
VPS16Q03308 TWF1YGR080W 999 nt3.65□□□□□ -1.83
VPS16Q03308 YIL058WYIL058W 285 nt3.65□□□□□ -1.83
VPS16Q03308 ABM1YJR108W 372 nt3.65□□□□□ -1.83
VPS16Q03308 AIM32YML050W 936 nt3.65□□□□□ -1.83
VPS16Q03308 COQ10YOL008W 624 nt3.65□□□□□ -1.83
VPS16Q03308 YDL180WYDL180W 1644 nt3.65□□□□□ -1.83
VPS16Q03308 YGR027W-BYGR027W-B 5268 nt3.65□□□□□ -1.83
VPS16Q03308 YLR227W-BYLR227W-B 5268 nt3.65□□□□□ -1.83
VPS16Q03308 YPR158C-DYPR158C-D 5268 nt3.65□□□□□ -1.83
VPS16Q03308 TAF2YCR042C 4224 nt3.65□□□□□ -1.83
VPS16Q03308 HPA3YEL066W 540 nt3.64□□□□□ -1.83
VPS16Q03308 FYV4YHR059W 393 nt3.64□□□□□ -1.83
VPS16Q03308 YHR139C-AYHR139C-A 312 nt3.64□□□□□ -1.83
VPS16Q03308 SNX41YDR425W 1878 nt3.63□□□□□ -1.83
VPS16Q03308 GPI8YDR331W 1236 nt3.63□□□□□ -1.83
VPS16Q03308 CAJ1YER048C 1176 nt3.63□□□□□ -1.83
VPS16Q03308 tT(UGU)Q1tT(UGU)Q1 76 nt3.63□□□□□ -1.83
VPS16Q03308 TIM8YJR135W-A 264 nt3.63□□□□□ -1.83
VPS16Q03308 MRPL31YKL138C 396 nt3.63□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 41.5 ms