Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cacna1aP97445 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cacna1aP97445 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1aP97445 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1aP97445 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1aP97445 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1aP97445 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1aP97445 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cacna1aP97445 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1aP97445 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1aP97445 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1aP97445 Gm6443-201ENSMUST00000203599 874 ntBASIC16.53■□□□□ 0.24
Cacna1aP97445 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1aP97445 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1aP97445 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1aP97445 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1aP97445 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1aP97445 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.52■□□□□ 0.24
Cacna1aP97445 Mzt1-203ENSMUST00000227948 952 ntBASIC16.52■□□□□ 0.24
Cacna1aP97445 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cacna1aP97445 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cacna1aP97445 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cacna1aP97445 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cacna1aP97445 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cacna1aP97445 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cacna1aP97445 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cacna1aP97445 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Cacna1aP97445 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cacna1aP97445 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cacna1aP97445 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.51■□□□□ 0.23
Cacna1aP97445 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1aP97445 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1aP97445 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1aP97445 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.51■□□□□ 0.23
Cacna1aP97445 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Cacna1aP97445 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.51■□□□□ 0.23
Cacna1aP97445 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1aP97445 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1aP97445 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1aP97445 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1aP97445 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1aP97445 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Cacna1aP97445 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1aP97445 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.51■□□□□ 0.23
Cacna1aP97445 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.51■□□□□ 0.23
Cacna1aP97445 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1aP97445 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.51■□□□□ 0.23
Cacna1aP97445 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.51■□□□□ 0.23
Cacna1aP97445 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cacna1aP97445 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1aP97445 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1aP97445 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1aP97445 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1aP97445 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1aP97445 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1aP97445 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.5■□□□□ 0.23
Cacna1aP97445 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.5■□□□□ 0.23
Cacna1aP97445 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1aP97445 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1aP97445 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.5■□□□□ 0.23
Cacna1aP97445 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1aP97445 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1aP97445 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.5■□□□□ 0.23
Cacna1aP97445 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1aP97445 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.5■□□□□ 0.23
Cacna1aP97445 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1aP97445 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1aP97445 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1aP97445 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.49■□□□□ 0.23
Cacna1aP97445 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1aP97445 Gm27463-201ENSMUST00000183569 57 ntBASIC16.49■□□□□ 0.23
Cacna1aP97445 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1aP97445 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1aP97445 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1aP97445 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Cacna1aP97445 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Cacna1aP97445 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1aP97445 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
Cacna1aP97445 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1aP97445 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1aP97445 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1aP97445 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1aP97445 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1aP97445 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1aP97445 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.49■□□□□ 0.23
Cacna1aP97445 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1aP97445 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cacna1aP97445 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.48■□□□□ 0.23
Cacna1aP97445 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.48■□□□□ 0.23
Cacna1aP97445 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cacna1aP97445 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cacna1aP97445 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cacna1aP97445 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cacna1aP97445 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cacna1aP97445 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cacna1aP97445 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cacna1aP97445 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cacna1aP97445 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cacna1aP97445 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cacna1aP97445 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms