Protein–RNA interactions for Protein: P53836

CAF120, CCR4-NOT transcriptional complex subunit CAF120, yeastyeast

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF120P53836 MZM1YDR493W 372 nt4.38□□□□□ -1.71
CAF120P53836 SNA2YDR525W-A 240 nt4.38□□□□□ -1.71
CAF120P53836 tK(CUU)CtK(CUU)C 73 nt4.38□□□□□ -1.71
CAF120P53836 tK(CUU)D1tK(CUU)D1 73 nt4.38□□□□□ -1.71
CAF120P53836 tK(CUU)D2tK(CUU)D2 73 nt4.38□□□□□ -1.71
CAF120P53836 tK(CUU)E1tK(CUU)E1 73 nt4.38□□□□□ -1.71
CAF120P53836 tK(CUU)E2tK(CUU)E2 73 nt4.38□□□□□ -1.71
CAF120P53836 tK(CUU)FtK(CUU)F 73 nt4.38□□□□□ -1.71
CAF120P53836 tK(CUU)G1tK(CUU)G1 73 nt4.38□□□□□ -1.71
CAF120P53836 tK(CUU)G2tK(CUU)G2 73 nt4.38□□□□□ -1.71
CAF120P53836 tK(CUU)G3tK(CUU)G3 73 nt4.38□□□□□ -1.71
CAF120P53836 tK(CUU)ItK(CUU)I 73 nt4.38□□□□□ -1.71
CAF120P53836 tK(CUU)JtK(CUU)J 73 nt4.38□□□□□ -1.71
CAF120P53836 tK(CUU)KtK(CUU)K 73 nt4.38□□□□□ -1.71
CAF120P53836 tK(CUU)MtK(CUU)M 73 nt4.38□□□□□ -1.71
CAF120P53836 tK(CUU)PtK(CUU)P 73 nt4.38□□□□□ -1.71
CAF120P53836 YIL142C-AYIL142C-A 333 nt4.38□□□□□ -1.71
CAF120P53836 RPS21BYJL136C 264 nt4.38□□□□□ -1.71
CAF120P53836 SNX41YDR425W 1878 nt4.37□□□□□ -1.71
CAF120P53836 YGR242WYGR242W 309 nt4.37□□□□□ -1.71
CAF120P53836 YOR161W-BYOR161W-B 261 nt4.37□□□□□ -1.71
CAF120P53836 YBR238CYBR238C 2196 nt4.37□□□□□ -1.71
CAF120P53836 YDR061WYDR061W 1620 nt4.36□□□□□ -1.71
CAF120P53836 ALG8YOR067C 1734 nt4.36□□□□□ -1.71
CAF120P53836 FMP10YER182W 735 nt4.36□□□□□ -1.71
CAF120P53836 USE1YGL098W 738 nt4.36□□□□□ -1.71
CAF120P53836 RPL14BYHL001W 417 nt4.36□□□□□ -1.71
CAF120P53836 YIL141WYIL141W 390 nt4.36□□□□□ -1.71
CAF120P53836 YIL165CYIL165C 360 nt4.36□□□□□ -1.71
CAF120P53836 CWC24YLR323C 780 nt4.36□□□□□ -1.71
CAF120P53836 VPS64YDR200C 1815 nt4.36□□□□□ -1.71
CAF120P53836 KIN2YLR096W 3444 nt4.36□□□□□ -1.71
CAF120P53836 RLM1YPL089C 2031 nt4.36□□□□□ -1.71
CAF120P53836 POL1YNL102W 4407 nt4.35□□□□□ -1.71
CAF120P53836 DAD4YDR320C-A 219 nt4.35□□□□□ -1.71
CAF120P53836 YEL018C-AYEL018C-A 534 nt4.35□□□□□ -1.71
CAF120P53836 COA3YJL062W-A 258 nt4.35□□□□□ -1.71
CAF120P53836 YLR012CYLR012C 300 nt4.35□□□□□ -1.71
CAF120P53836 MRPL33YMR286W 261 nt4.35□□□□□ -1.71
CAF120P53836 RPL16BYNL069C 597 nt4.35□□□□□ -1.71
CAF120P53836 YNL103W-AYNL103W-A 90 nt4.35□□□□□ -1.71
CAF120P53836 RSC3YDR303C 2658 nt4.35□□□□□ -1.71
CAF120P53836 PDR12YPL058C 4536 nt4.34□□□□□ -1.71
CAF120P53836 YPL080CYPL080C 327 nt4.34□□□□□ -1.71
CAF120P53836 ATP15YPL271W 189 nt4.34□□□□□ -1.71
CAF120P53836 PHO88YBR106W 567 nt4.34□□□□□ -1.71
CAF120P53836 NUP2YLR335W 2163 nt4.34□□□□□ -1.72
CAF120P53836 EPO1YMR124W 2832 nt4.33□□□□□ -1.72
CAF120P53836 NRP1YDL167C 2160 nt4.33□□□□□ -1.72
CAF120P53836 YCR081C-AYCR081C-A 237 nt4.33□□□□□ -1.72
CAF120P53836 RPS8BYER102W 603 nt4.33□□□□□ -1.72
CAF120P53836 MVB12YGR206W 306 nt4.33□□□□□ -1.72
CAF120P53836 tS(AGA)D3tS(AGA)D3 83 nt4.33□□□□□ -1.72
CAF120P53836 RPS17AYML024W 411 nt4.33□□□□□ -1.72
CAF120P53836 snR52snR52 92 nt4.33□□□□□ -1.72
CAF120P53836 UBP12YJL197W 3765 nt4.32□□□□□ -1.72
CAF120P53836 YBR184WYBR184W 1572 nt4.32□□□□□ -1.72
CAF120P53836 YGL217CYGL217C 342 nt4.32□□□□□ -1.72
CAF120P53836 RPC10YHR143W-A 213 nt4.32□□□□□ -1.72
CAF120P53836 RRT15YLR162W-A 189 nt4.32□□□□□ -1.72
CAF120P53836 LSM7YNL147W 348 nt4.32□□□□□ -1.72
CAF120P53836 ISW2YOR304W 3363 nt4.32□□□□□ -1.72
CAF120P53836 ICR1ICR1 3199 nt4.32□□□□□ -1.72
CAF120P53836 AI5_ALPHAQ0070 1893 nt4.31□□□□□ -1.72
CAF120P53836 YLR177WYLR177W 1887 nt4.31□□□□□ -1.72
CAF120P53836 YHL041WYHL041W 450 nt4.31□□□□□ -1.72
CAF120P53836 BCD1YHR040W 1101 nt4.31□□□□□ -1.72
CAF120P53836 PCC1YKR095W-A 267 nt4.31□□□□□ -1.72
CAF120P53836 YNL097C-BYNL097C-B 123 nt4.31□□□□□ -1.72
CAF120P53836 RFC3YNL290W 1023 nt4.31□□□□□ -1.72
CAF120P53836 RPB10YOR210W 213 nt4.31□□□□□ -1.72
CAF120P53836 TRX3YCR083W 384 nt4.3□□□□□ -1.72
CAF120P53836 YDL011CYDL011C 324 nt4.3□□□□□ -1.72
CAF120P53836 YER188C-AYER188C-A 300 nt4.3□□□□□ -1.72
CAF120P53836 FBP1YLR377C 1047 nt4.3□□□□□ -1.72
CAF120P53836 LDS2YOL047C 1071 nt4.3□□□□□ -1.72
CAF120P53836 EGD1YPL037C 474 nt4.3□□□□□ -1.72
CAF120P53836 MTR10YOR160W 2919 nt4.29□□□□□ -1.72
CAF120P53836 BCK2YER167W 2556 nt4.29□□□□□ -1.72
CAF120P53836 snR7-SsnR7-S 179 nt4.29□□□□□ -1.72
CAF120P53836 PFY1YOR122C 381 nt4.29□□□□□ -1.72
CAF120P53836 YPR063CYPR063C 423 nt4.29□□□□□ -1.72
CAF120P53836 snR35snR35 204 nt4.29□□□□□ -1.72
CAF120P53836 YBR201C-AYBR201C-A 204 nt4.29□□□□□ -1.72
CAF120P53836 YDR338CYDR338C 2088 nt4.29□□□□□ -1.72
CAF120P53836 NUP133YKR082W 3474 nt4.29□□□□□ -1.72
CAF120P53836 KIN82YCR091W 2163 nt4.29□□□□□ -1.72
CAF120P53836 YOL075CYOL075C 3885 nt4.28□□□□□ -1.72
CAF120P53836 SKG6YHR149C 2205 nt4.28□□□□□ -1.72
CAF120P53836 YDR426CYDR426C 378 nt4.28□□□□□ -1.72
CAF120P53836 YDR442WYDR442W 393 nt4.28□□□□□ -1.72
CAF120P53836 EMP24YGL200C 612 nt4.28□□□□□ -1.72
CAF120P53836 RPA12YJR063W 378 nt4.28□□□□□ -1.72
CAF120P53836 YML037CYML037C 1023 nt4.28□□□□□ -1.72
CAF120P53836 RPB11YOL005C 363 nt4.28□□□□□ -1.72
CAF120P53836 MET4YNL103W 2019 nt4.28□□□□□ -1.73
CAF120P53836 SPT10YJL127C 1923 nt4.27□□□□□ -1.73
CAF120P53836 PMP2YEL017C-A 132 nt4.27□□□□□ -1.73
CAF120P53836 YMR321CYMR321C 318 nt4.27□□□□□ -1.73
CAF120P53836 TOF2YKR010C 2316 nt4.27□□□□□ -1.73
Retrieved 100 of 7,029 protein–RNA pairs in 118.3 ms