Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC25.73■■□□□ 1.717e-8■□□□□ 9.7
XRCC6P12956 UBALD1-207ENST00000591113 659 ntTSL 525.01■■□□□ 1.597e-8■□□□□ 9.7
XRCC6P12956 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.567e-8■□□□□ 9.7
XRCC6P12956 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC24.43■■□□□ 1.57e-8■□□□□ 9.7
XRCC6P12956 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.63■■□□□ 1.057e-8■□□□□ 9.7
XRCC6P12956 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC24.98■■□□□ 1.592e-8■□□□□ 9.6
XRCC6P12956 SPPL2B-204ENST00000587851 586 ntTSL 324.02■■□□□ 1.442e-8■□□□□ 9.6
XRCC6P12956 SPPL2B-201ENST00000585725 583 ntTSL 318.56■□□□□ 0.562e-8■□□□□ 9.6
XRCC6P12956 SPPL2B-206ENST00000593243 551 ntTSL 417.48■□□□□ 0.392e-8■□□□□ 9.6
XRCC6P12956 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC25.95■■□□□ 1.752e-6■□□□□ 9.6
XRCC6P12956 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.642e-6■□□□□ 9.6
XRCC6P12956 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC24.44■■□□□ 1.52e-6■□□□□ 9.6
XRCC6P12956 E4F1-209ENST00000569796 5931 ntTSL 219.04■□□□□ 0.642e-6■□□□□ 9.6
XRCC6P12956 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC16.42■□□□□ 0.225e-8■□□□□ 9.6
XRCC6P12956 DDX5-227ENST00000583894 712 ntTSL 211.01□□□□□ -0.655e-8■□□□□ 9.6
XRCC6P12956 DDX5-206ENST00000578190 582 ntTSL 38.48□□□□□ -1.055e-8■□□□□ 9.6
XRCC6P12956 DDX5-230ENST00000584549 807 ntTSL 27.34□□□□□ -1.235e-8■□□□□ 9.6
XRCC6P12956 DDX5-204ENST00000577787 838 ntTSL 27.34□□□□□ -1.235e-8■□□□□ 9.6
XRCC6P12956 DDX5-225ENST00000583562 465 ntTSL 1 (best)6.66□□□□□ -1.345e-8■□□□□ 9.6
XRCC6P12956 DUS1L-215ENST00000582529 1212 ntTSL 529.45■■■□□ 2.311e-6■□□□□ 9.6
XRCC6P12956 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.422e-6■□□□□ 9.6
XRCC6P12956 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC15.42■□□□□ 0.062e-6■□□□□ 9.6
XRCC6P12956 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.464e-9■□□□□ 9.6
XRCC6P12956 DDIT4-202ENST00000471240 521 ntTSL 223.82■■□□□ 1.44e-9■□□□□ 9.6
XRCC6P12956 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.364e-9■□□□□ 9.6
XRCC6P12956 DDIT4-203ENST00000473155 753 ntTSL 1 (best)22.91■■□□□ 1.264e-9■□□□□ 9.6
XRCC6P12956 HOXB7-203ENST00000567101 528 ntTSL 211.52□□□□□ -0.574e-9■□□□□ 9.6
XRCC6P12956 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.284e-7■□□□□ 9.6
XRCC6P12956 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.014e-7■□□□□ 9.6
XRCC6P12956 CREBZF-201ENST00000260058 1431 ntTSL 218.83■□□□□ 0.65e-8■□□□□ 9.6
XRCC6P12956 RPS13-208ENST00000531908 746 ntTSL 26.19□□□□□ -1.422e-37■□□□□ 9.5
XRCC6P12956 SNORD14B-201ENST00000364533 90 ntBASIC3.46□□□□□ -1.862e-37■□□□□ 9.5
XRCC6P12956 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC23.04■■□□□ 1.282e-10■□□□□ 9.5
XRCC6P12956 KMT2A-210ENST00000532204 499 ntTSL 222.02■■□□□ 1.122e-10■□□□□ 9.5
XRCC6P12956 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.12e-10■□□□□ 9.5
XRCC6P12956 KMT2A-208ENST00000529852 3323 ntTSL 215.7■□□□□ 0.12e-10■□□□□ 9.5
XRCC6P12956 AC004687.1-201ENST00000579003 1625 ntBASIC24.61■■□□□ 1.531e-45■□□□□ 9.5
XRCC6P12956 LTBP4-226ENST00000599724 910 ntTSL 517.62■□□□□ 0.418e-6■□□□□ 9.5
XRCC6P12956 HBG2-201ENST00000336906 602 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.62e-12■□□□□ 9.5
XRCC6P12956 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.7□□□□□ -1.182e-12■□□□□ 9.5
XRCC6P12956 DPP7-211ENST00000485456 968 ntTSL 526.91■■□□□ 1.99e-7■□□□□ 9.5
XRCC6P12956 DPP7-205ENST00000472306 919 ntTSL 524.96■■□□□ 1.599e-7■□□□□ 9.5
XRCC6P12956 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.489e-7■□□□□ 9.5
XRCC6P12956 DPP7-210ENST00000483783 958 ntTSL 224.16■■□□□ 1.469e-7■□□□□ 9.5
XRCC6P12956 DPP7-202ENST00000460830 639 ntTSL 222.25■■□□□ 1.159e-7■□□□□ 9.5
XRCC6P12956 DPP7-206ENST00000473532 1144 ntTSL 519.15■□□□□ 0.669e-7■□□□□ 9.5
XRCC6P12956 DPP7-203ENST00000463619 775 ntTSL 316.03■□□□□ 0.169e-7■□□□□ 9.5
XRCC6P12956 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.221e-25■□□□□ 9.5
XRCC6P12956 SNORD91A-202ENST00000609620 191 ntBASIC9.89□□□□□ -0.831e-25■□□□□ 9.5
XRCC6P12956 TSR1-203ENST00000575049 387 ntTSL 35.19□□□□□ -1.581e-25■□□□□ 9.5
XRCC6P12956 SNORD91A-201ENST00000390861 95 nt1.38□□□□□ -2.191e-25■□□□□ 9.5
XRCC6P12956 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.166e-6■□□□□ 9.5
XRCC6P12956 LTBP4-212ENST00000595118 2446 ntTSL 221.38■■□□□ 1.016e-6■□□□□ 9.5
XRCC6P12956 LTBP4-229ENST00000601032 2019 ntTSL 1 (best)21.33■■□□□ 1.016e-6■□□□□ 9.5
XRCC6P12956 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.836e-6■□□□□ 9.5
XRCC6P12956 LTBP4-204ENST00000318809 1700 ntTSL 219.65■□□□□ 0.746e-6■□□□□ 9.5
XRCC6P12956 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.66e-6■□□□□ 9.5
XRCC6P12956 LTBP4-202ENST00000243562 3140 ntTSL 217.77■□□□□ 0.436e-6■□□□□ 9.5
XRCC6P12956 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.782e-7■□□□□ 9.5
XRCC6P12956 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.72e-7■□□□□ 9.5
XRCC6P12956 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.432e-7■□□□□ 9.5
XRCC6P12956 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.162e-7■□□□□ 9.5
XRCC6P12956 EEF2-205ENST00000598436 549 ntTSL 214.3□□□□□ -0.124e-25■□□□□ 9.5
XRCC6P12956 CREBZF-203ENST00000525639 2850 ntTSL 522.54■■□□□ 1.22e-6■□□□□ 9.4
XRCC6P12956 CREBZF-202ENST00000490820 4329 ntTSL 1 (best)16.76■□□□□ 0.272e-6■□□□□ 9.4
XRCC6P12956 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC16.59■□□□□ 0.252e-6■□□□□ 9.4
XRCC6P12956 CREBZF-208ENST00000531515 724 ntTSL 315.83■□□□□ 0.122e-6■□□□□ 9.4
XRCC6P12956 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC7.08□□□□□ -1.282e-6■□□□□ 9.4
XRCC6P12956 AC079062.1-202ENST00000581011 2636 ntTSL 1 (best) BASIC11.71□□□□□ -0.549e-10■□□□□ 9.4
XRCC6P12956 AC079062.1-201ENST00000584544 1396 ntTSL 1 (best) BASIC10.53□□□□□ -0.729e-10■□□□□ 9.4
XRCC6P12956 AC079062.1-204ENST00000583405 474 ntTSL 28.8□□□□□ -19e-10■□□□□ 9.4
XRCC6P12956 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.23□□□□□ -1.579e-10■□□□□ 9.4
XRCC6P12956 MXD3-206ENST00000503782 1854 ntTSL 234.18■■■■□ 3.062e-6■□□□□ 9.4
XRCC6P12956 MXD3-205ENST00000503473 2279 ntTSL 532.6■■■□□ 2.812e-6■□□□□ 9.4
XRCC6P12956 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.452e-6■□□□□ 9.4
XRCC6P12956 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.382e-6■□□□□ 9.4
XRCC6P12956 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC27.83■■■□□ 2.052e-18■□□□□ 9.4
XRCC6P12956 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC27.3■■□□□ 1.962e-6■□□□□ 9.4
XRCC6P12956 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.952e-6■□□□□ 9.4
XRCC6P12956 HIST1H3J-202ENST00000479986 522 ntTSL 224.54■■□□□ 1.522e-6■□□□□ 9.4
XRCC6P12956 LZTR1-202ENST00000414985 872 ntTSL 524.53■■□□□ 1.522e-6■□□□□ 9.4
XRCC6P12956 MVD-209ENST00000565149 2352 ntTSL 1 (best)24.43■■□□□ 1.51e-9■□□□□ 9.4
XRCC6P12956 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC24.26■■□□□ 1.472e-6■□□□□ 9.4
XRCC6P12956 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC23.52■■□□□ 1.362e-6■□□□□ 9.4
XRCC6P12956 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.352e-8■□□□□ 9.4
XRCC6P12956 MCM7-209ENST00000485286 2900 ntTSL 223■■□□□ 1.272e-6■□□□□ 9.4
XRCC6P12956 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC22.66■■□□□ 1.228e-21■□□□□ 9.4
XRCC6P12956 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.212e-6■□□□□ 9.4
XRCC6P12956 COX5B-202ENST00000464949 613 ntTSL 522.63■■□□□ 1.212e-8■□□□□ 9.4
XRCC6P12956 MXD3-204ENST00000502529 440 ntTSL 322.63■■□□□ 1.212e-6■□□□□ 9.4
XRCC6P12956 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.142e-8■□□□□ 9.4
XRCC6P12956 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC22.12■■□□□ 1.132e-6■□□□□ 9.4
XRCC6P12956 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC21.91■■□□□ 1.12e-6■□□□□ 9.4
XRCC6P12956 ABCB6-202ENST00000295750 2238 ntTSL 521.63■■□□□ 1.052e-6■□□□□ 9.4
XRCC6P12956 CDC45-204ENST00000428937 577 ntTSL 520.74■□□□□ 0.912e-6■□□□□ 9.4
XRCC6P12956 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.882e-6■□□□□ 9.4
XRCC6P12956 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC20.46■□□□□ 0.872e-8■□□□□ 9.4
XRCC6P12956 MAN2C1-204ENST00000561693 1152 ntTSL 520.26■□□□□ 0.832e-6■□□□□ 9.4
XRCC6P12956 ABCB6-205ENST00000448398 882 ntTSL 520.24■□□□□ 0.832e-6■□□□□ 9.4
XRCC6P12956 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.812e-8■□□□□ 9.4
Retrieved 100 of 6,788 protein–RNA pairs in 74.5 ms