Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 BC021767-201ENSMUST00000126387 1716 ntBASIC20.8■□□□□ 0.92
Foxd1Q61345 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Foxd1Q61345 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Foxd1Q61345 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Foxd1Q61345 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Foxd1Q61345 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.79■□□□□ 0.92
Foxd1Q61345 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Foxd1Q61345 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Foxd1Q61345 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.79■□□□□ 0.92
Foxd1Q61345 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Foxd1Q61345 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Foxd1Q61345 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Foxd1Q61345 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.79■□□□□ 0.92
Foxd1Q61345 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Foxd1Q61345 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.79■□□□□ 0.92
Foxd1Q61345 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC20.78■□□□□ 0.92
Foxd1Q61345 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Foxd1Q61345 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Foxd1Q61345 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Foxd1Q61345 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Foxd1Q61345 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Foxd1Q61345 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Foxd1Q61345 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Foxd1Q61345 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Foxd1Q61345 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Foxd1Q61345 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Foxd1Q61345 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Foxd1Q61345 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Foxd1Q61345 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.77■□□□□ 0.92
Foxd1Q61345 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Foxd1Q61345 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.77■□□□□ 0.92
Foxd1Q61345 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.77■□□□□ 0.92
Foxd1Q61345 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Foxd1Q61345 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Foxd1Q61345 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Foxd1Q61345 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Foxd1Q61345 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Foxd1Q61345 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Foxd1Q61345 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Foxd1Q61345 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Foxd1Q61345 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Foxd1Q61345 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Foxd1Q61345 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Foxd1Q61345 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Foxd1Q61345 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Foxd1Q61345 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Foxd1Q61345 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC20.76■□□□□ 0.91
Foxd1Q61345 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Foxd1Q61345 Gm28659-201ENSMUST00000188013 759 ntBASIC20.76■□□□□ 0.91
Foxd1Q61345 AC134329.2-201ENSMUST00000217897 428 ntBASIC20.76■□□□□ 0.91
Foxd1Q61345 AC164629.2-201ENSMUST00000217916 270 ntBASIC20.76■□□□□ 0.91
Foxd1Q61345 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Foxd1Q61345 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Foxd1Q61345 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Foxd1Q61345 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Foxd1Q61345 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Foxd1Q61345 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Foxd1Q61345 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Foxd1Q61345 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Foxd1Q61345 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Foxd1Q61345 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Foxd1Q61345 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Foxd1Q61345 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Foxd1Q61345 Gm3375-201ENSMUST00000203929 796 ntBASIC20.75■□□□□ 0.91
Foxd1Q61345 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.75■□□□□ 0.91
Foxd1Q61345 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Foxd1Q61345 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Foxd1Q61345 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.75■□□□□ 0.91
Foxd1Q61345 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Foxd1Q61345 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Foxd1Q61345 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Foxd1Q61345 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Foxd1Q61345 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Foxd1Q61345 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Foxd1Q61345 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Foxd1Q61345 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC20.74■□□□□ 0.91
Foxd1Q61345 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Foxd1Q61345 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Foxd1Q61345 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Foxd1Q61345 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Foxd1Q61345 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Foxd1Q61345 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.73■□□□□ 0.91
Foxd1Q61345 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Foxd1Q61345 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Foxd1Q61345 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Foxd1Q61345 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Foxd1Q61345 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Foxd1Q61345 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Foxd1Q61345 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.73■□□□□ 0.91
Foxd1Q61345 AW822252-206ENSMUST00000208904 237 ntBASIC20.73■□□□□ 0.91
Foxd1Q61345 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
Foxd1Q61345 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Foxd1Q61345 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.73■□□□□ 0.91
Foxd1Q61345 Golph3-205ENSMUST00000228671 2842 ntBASIC20.73■□□□□ 0.91
Foxd1Q61345 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Foxd1Q61345 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Foxd1Q61345 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Foxd1Q61345 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.73■□□□□ 0.91
Foxd1Q61345 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Foxd1Q61345 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms