Protein–RNA interactions for Protein: Q12472

TY2B-DR1, Transposon Ty2-DR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2B-DR1Q12472 UPS2YLR168C 693 nt1.28□□□□□ -2.2
TY2B-DR1Q12472 CDC37YDR168W 1521 nt1.27□□□□□ -2.21
TY2B-DR1Q12472 ECM18YDR125C 1362 nt1.27□□□□□ -2.21
TY2B-DR1Q12472 YGL165CYGL165C 579 nt1.27□□□□□ -2.21
TY2B-DR1Q12472 NCE101YJL205C 162 nt1.27□□□□□ -2.21
TY2B-DR1Q12472 URA5YML106W 681 nt1.27□□□□□ -2.21
TY2B-DR1Q12472 LSM2YBL026W 288 nt1.27□□□□□ -2.21
TY2B-DR1Q12472 CMR3YPR013C 954 nt1.27□□□□□ -2.21
TY2B-DR1Q12472 SFG1YOR315W 1041 nt1.26□□□□□ -2.21
TY2B-DR1Q12472 IRC4YDR540C 540 nt1.26□□□□□ -2.21
TY2B-DR1Q12472 YDR521WYDR521W 336 nt1.25□□□□□ -2.21
TY2B-DR1Q12472 YNL043CYNL043C 321 nt1.25□□□□□ -2.21
TY2B-DR1Q12472 THI80YOR143C 960 nt1.25□□□□□ -2.21
TY2B-DR1Q12472 SEC21YNL287W 2808 nt1.25□□□□□ -2.21
TY2B-DR1Q12472 BUL2YML111W 2763 nt1.24□□□□□ -2.21
TY2B-DR1Q12472 YDL183CYDL183C 963 nt1.24□□□□□ -2.21
TY2B-DR1Q12472 DPP1YDR284C 870 nt1.24□□□□□ -2.21
TY2B-DR1Q12472 UBC7YMR022W 498 nt1.24□□□□□ -2.21
TY2B-DR1Q12472 YMR320WYMR320W 306 nt1.24□□□□□ -2.21
TY2B-DR1Q12472 AAH1YNL141W 1044 nt1.24□□□□□ -2.21
TY2B-DR1Q12472 YOR218CYOR218C 420 nt1.24□□□□□ -2.21
TY2B-DR1Q12472 UTP30YKR060W 825 nt1.24□□□□□ -2.21
TY2B-DR1Q12472 PRM9YAR031W 897 nt1.24□□□□□ -2.21
TY2B-DR1Q12472 YNL184CYNL184C 327 nt1.24□□□□□ -2.21
TY2B-DR1Q12472 IRA2YOL081W 9240 nt1.23□□□□□ -2.21
TY2B-DR1Q12472 SPB4YFL002C 1821 nt1.23□□□□□ -2.21
TY2B-DR1Q12472 AIM11YER093C-A 414 nt1.23□□□□□ -2.21
TY2B-DR1Q12472 tT(AGU)BtT(AGU)B 73 nt1.23□□□□□ -2.21
TY2B-DR1Q12472 tT(AGU)CtT(AGU)C 73 nt1.23□□□□□ -2.21
TY2B-DR1Q12472 tT(AGU)DtT(AGU)D 73 nt1.23□□□□□ -2.21
TY2B-DR1Q12472 tT(AGU)HtT(AGU)H 73 nt1.23□□□□□ -2.21
TY2B-DR1Q12472 tT(AGU)I1tT(AGU)I1 73 nt1.23□□□□□ -2.21
TY2B-DR1Q12472 tT(AGU)I2tT(AGU)I2 73 nt1.23□□□□□ -2.21
TY2B-DR1Q12472 tT(AGU)JtT(AGU)J 73 nt1.23□□□□□ -2.21
TY2B-DR1Q12472 tT(AGU)N1tT(AGU)N1 73 nt1.23□□□□□ -2.21
TY2B-DR1Q12472 tT(AGU)N2tT(AGU)N2 73 nt1.23□□□□□ -2.21
TY2B-DR1Q12472 tT(AGU)O1tT(AGU)O1 73 nt1.23□□□□□ -2.21
TY2B-DR1Q12472 tT(AGU)O2tT(AGU)O2 73 nt1.23□□□□□ -2.21
TY2B-DR1Q12472 RDN58-1RDN58-1 158 nt1.23□□□□□ -2.21
TY2B-DR1Q12472 RDN58-2RDN58-2 158 nt1.23□□□□□ -2.21
TY2B-DR1Q12472 RPS17AYML024W 411 nt1.23□□□□□ -2.21
TY2B-DR1Q12472 SNO1YMR095C 675 nt1.23□□□□□ -2.21
TY2B-DR1Q12472 HNT3YOR258W 654 nt1.23□□□□□ -2.21
TY2B-DR1Q12472 21S_rRNA21S_rRNA 3296 nt1.23□□□□□ -2.21
TY2B-DR1Q12472 FBP26YJL155C 1359 nt1.23□□□□□ -2.21
TY2B-DR1Q12472 BAT1YHR208W 1182 nt1.22□□□□□ -2.21
TY2B-DR1Q12472 CMC4YMR194C-B 222 nt1.22□□□□□ -2.21
TY2B-DR1Q12472 VAM6YDL077C 3150 nt1.22□□□□□ -2.21
TY2B-DR1Q12472 RSM22YKL155C 1887 nt1.22□□□□□ -2.21
TY2B-DR1Q12472 ARI1YGL157W 1044 nt1.21□□□□□ -2.22
TY2B-DR1Q12472 RPL11BYGR085C 525 nt1.21□□□□□ -2.22
TY2B-DR1Q12472 YKL162CYKL162C 1209 nt1.21□□□□□ -2.22
TY2B-DR1Q12472 RPL11AYPR102C 525 nt1.21□□□□□ -2.22
TY2B-DR1Q12472 BRE5YNR051C 1548 nt1.21□□□□□ -2.22
TY2B-DR1Q12472 ITT1YML068W 1395 nt1.21□□□□□ -2.22
TY2B-DR1Q12472 TRM82YDR165W 1335 nt1.21□□□□□ -2.22
TY2B-DR1Q12472 RPC11YDR045C 333 nt1.21□□□□□ -2.22
TY2B-DR1Q12472 YIL059CYIL059C 366 nt1.21□□□□□ -2.22
TY2B-DR1Q12472 YNL114CYNL114C 372 nt1.21□□□□□ -2.22
TY2B-DR1Q12472 GYL1YMR192W 2163 nt1.2□□□□□ -2.22
TY2B-DR1Q12472 BRO1YPL084W 2535 nt1.2□□□□□ -2.22
TY2B-DR1Q12472 SPO24YPR036W-A 204 nt1.2□□□□□ -2.22
TY2B-DR1Q12472 YCL076WYCL076W 744 nt1.19□□□□□ -2.22
TY2B-DR1Q12472 MPO1YGL010W 525 nt1.19□□□□□ -2.22
TY2B-DR1Q12472 PEP8YJL053W 1140 nt1.19□□□□□ -2.22
TY2B-DR1Q12472 OST2YOR103C 393 nt1.19□□□□□ -2.22
TY2B-DR1Q12472 IAH1YOR126C 717 nt1.19□□□□□ -2.22
TY2B-DR1Q12472 GAL7YBR018C 1101 nt1.19□□□□□ -2.22
TY2B-DR1Q12472 SKO1YNL167C 1944 nt1.18□□□□□ -2.22
TY2B-DR1Q12472 YGR050CYGR050C 357 nt1.18□□□□□ -2.22
TY2B-DR1Q12472 PAU8YAL068C 363 nt1.18□□□□□ -2.22
TY2B-DR1Q12472 PAU20YOL161C 363 nt1.18□□□□□ -2.22
TY2B-DR1Q12472 TRS65YGR166W 1683 nt1.18□□□□□ -2.22
TY2B-DR1Q12472 HMS1YOR032C 1305 nt1.18□□□□□ -2.22
TY2B-DR1Q12472 PLM2YDR501W 1566 nt1.17□□□□□ -2.22
TY2B-DR1Q12472 DBF20YPR111W 1695 nt1.17□□□□□ -2.22
TY2B-DR1Q12472 YKL145W-AYKL145W-A 93 nt1.16□□□□□ -2.22
TY2B-DR1Q12472 YNL234WYNL234W 1281 nt1.16□□□□□ -2.22
TY2B-DR1Q12472 VID24YBR105C 1089 nt1.16□□□□□ -2.22
TY2B-DR1Q12472 RTT101YJL047C 2529 nt1.16□□□□□ -2.22
TY2B-DR1Q12472 RAD9YDR217C 3930 nt1.16□□□□□ -2.22
TY2B-DR1Q12472 THO2YNL139C 4794 nt1.16□□□□□ -2.22
TY2B-DR1Q12472 YMR230W-AYMR230W-A 189 nt1.16□□□□□ -2.22
TY2B-DR1Q12472 MAD3YJL013C 1548 nt1.15□□□□□ -2.22
TY2B-DR1Q12472 EBP2YKL172W 1284 nt1.15□□□□□ -2.23
TY2B-DR1Q12472 YBL083CYBL083C 426 nt1.15□□□□□ -2.23
TY2B-DR1Q12472 VPS9YML097C 1356 nt1.15□□□□□ -2.23
TY2B-DR1Q12472 SNF5YBR289W 2718 nt1.14□□□□□ -2.23
TY2B-DR1Q12472 IRC3YDR332W 2070 nt1.14□□□□□ -2.23
TY2B-DR1Q12472 CDC36YDL165W 576 nt1.13□□□□□ -2.23
TY2B-DR1Q12472 RUD3YOR216C 1455 nt1.13□□□□□ -2.23
TY2B-DR1Q12472 YER066C-AYER066C-A 501 nt1.13□□□□□ -2.23
TY2B-DR1Q12472 URM1YIL008W 300 nt1.13□□□□□ -2.23
TY2B-DR1Q12472 PET130YJL023C 1044 nt1.13□□□□□ -2.23
TY2B-DR1Q12472 EAF1YDR359C 2949 nt1.12□□□□□ -2.23
TY2B-DR1Q12472 ATP22YDR350C 2055 nt1.12□□□□□ -2.23
TY2B-DR1Q12472 RPS26BYER131W 360 nt1.12□□□□□ -2.23
TY2B-DR1Q12472 YML084WYML084W 309 nt1.12□□□□□ -2.23
TY2B-DR1Q12472 HUB1YNR032C-A 222 nt1.12□□□□□ -2.23
TY2B-DR1Q12472 MSS11YMR164C 2277 nt1.12□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 31.3 ms