Protein–RNA interactions for Protein: Q08723

RPN8, 26S proteasome regulatory subunit RPN8, yeastyeast

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN8Q08723 SUS1YBR111W-A 291 nt2.33□□□□□ -2.04
RPN8Q08723 ASI3YNL008C 2031 nt2.33□□□□□ -2.04
RPN8Q08723 TMN3YER113C 2121 nt2.33□□□□□ -2.04
RPN8Q08723 MRP10YDL045W-A 288 nt2.32□□□□□ -2.04
RPN8Q08723 THG1YGR024C 714 nt2.32□□□□□ -2.04
RPN8Q08723 EST3YIL009C-A 546 nt2.32□□□□□ -2.04
RPN8Q08723 YJL133C-AYJL133C-A 225 nt2.32□□□□□ -2.04
RPN8Q08723 YJL147CYJL147C 1149 nt2.32□□□□□ -2.04
RPN8Q08723 YLR255CYLR255C 354 nt2.32□□□□□ -2.04
RPN8Q08723 YBR051WYBR051W 351 nt2.32□□□□□ -2.04
RPN8Q08723 MBA1YBR185C 837 nt2.32□□□□□ -2.04
RPN8Q08723 VHR1YIL056W 1923 nt2.31□□□□□ -2.04
RPN8Q08723 YDR248CYDR248C 582 nt2.31□□□□□ -2.04
RPN8Q08723 MIC19YFR011C 513 nt2.31□□□□□ -2.04
RPN8Q08723 PGD1YGL025C 1194 nt2.31□□□□□ -2.04
RPN8Q08723 YIL012WYIL012W 342 nt2.31□□□□□ -2.04
RPN8Q08723 ECI1YLR284C 843 nt2.31□□□□□ -2.04
RPN8Q08723 URA5YML106W 681 nt2.31□□□□□ -2.04
RPN8Q08723 RPL25YOL127W 429 nt2.31□□□□□ -2.04
RPN8Q08723 YPL119C-AYPL119C-A 264 nt2.31□□□□□ -2.04
RPN8Q08723 ADF1YCL058W-A 342 nt2.31□□□□□ -2.04
RPN8Q08723 IRC8YJL051W 2469 nt2.31□□□□□ -2.04
RPN8Q08723 TFB1YDR311W 1929 nt2.3□□□□□ -2.04
RPN8Q08723 SIP3YNL257C 3690 nt2.3□□□□□ -2.04
RPN8Q08723 TIM11YDR322C-A 291 nt2.3□□□□□ -2.04
RPN8Q08723 NTF2YER009W 378 nt2.3□□□□□ -2.04
RPN8Q08723 ICY1YMR195W 384 nt2.3□□□□□ -2.04
RPN8Q08723 YBR062CYBR062C 543 nt2.3□□□□□ -2.04
RPN8Q08723 CBP6YBR120C 489 nt2.3□□□□□ -2.04
RPN8Q08723 YGL109WYGL109W 324 nt2.29□□□□□ -2.04
RPN8Q08723 YIP1YGR172C 747 nt2.29□□□□□ -2.04
RPN8Q08723 YET1YKL065C 621 nt2.29□□□□□ -2.04
RPN8Q08723 YAL059C-AYAL059C-A 423 nt2.29□□□□□ -2.04
RPN8Q08723 RPS16AYMR143W 432 nt2.29□□□□□ -2.04
RPN8Q08723 PAI3YMR174C 207 nt2.29□□□□□ -2.04
RPN8Q08723 NOP14YDL148C 2433 nt2.29□□□□□ -2.04
RPN8Q08723 TOF1YNL273W 3717 nt2.28□□□□□ -2.04
RPN8Q08723 KAP123YER110C 3342 nt2.28□□□□□ -2.04
RPN8Q08723 SLF1YDR515W 1344 nt2.28□□□□□ -2.04
RPN8Q08723 CAJ1YER048C 1176 nt2.28□□□□□ -2.04
RPN8Q08723 YIR020C-BYIR020C-B 735 nt2.28□□□□□ -2.04
RPN8Q08723 RCN1YKL159C 636 nt2.28□□□□□ -2.04
RPN8Q08723 YKL165C-AYKL165C-A 234 nt2.28□□□□□ -2.04
RPN8Q08723 YRO2YBR054W 1035 nt2.28□□□□□ -2.04
RPN8Q08723 VMA9YCL005W-A 222 nt2.28□□□□□ -2.04
RPN8Q08723 YCL023CYCL023C 348 nt2.28□□□□□ -2.04
RPN8Q08723 PUT3YKL015W 2940 nt2.28□□□□□ -2.04
RPN8Q08723 SCD5YOR329C 2619 nt2.28□□□□□ -2.04
RPN8Q08723 YOL098CYOL098C 3114 nt2.28□□□□□ -2.04
RPN8Q08723 YDR338CYDR338C 2088 nt2.27□□□□□ -2.05
RPN8Q08723 ESC2YDR363W 1371 nt2.27□□□□□ -2.05
RPN8Q08723 YCR099CYCR099C 468 nt2.27□□□□□ -2.05
RPN8Q08723 RPL27BYDR471W 411 nt2.27□□□□□ -2.05
RPN8Q08723 YEA4YEL004W 1029 nt2.27□□□□□ -2.05
RPN8Q08723 RTS3YGR161C 792 nt2.27□□□□□ -2.05
RPN8Q08723 ATP7YKL016C 525 nt2.27□□□□□ -2.05
RPN8Q08723 RPS1AYLR441C 768 nt2.27□□□□□ -2.05
RPN8Q08723 SRL4YPL033C 846 nt2.27□□□□□ -2.05
RPN8Q08723 YCL002CYCL002C 792 nt2.27□□□□□ -2.05
RPN8Q08723 PCK1YKR097W 1650 nt2.27□□□□□ -2.05
RPN8Q08723 MGM1YOR211C 2646 nt2.27□□□□□ -2.05
RPN8Q08723 SIR4YDR227W 4077 nt2.27□□□□□ -2.05
RPN8Q08723 YOL057WYOL057W 2136 nt2.26□□□□□ -2.05
RPN8Q08723 YCR013CYCR013C 648 nt2.26□□□□□ -2.05
RPN8Q08723 YRB1YDR002W 606 nt2.26□□□□□ -2.05
RPN8Q08723 RSM18YER050C 417 nt2.26□□□□□ -2.05
RPN8Q08723 AAD16YFL057C 459 nt2.26□□□□□ -2.05
RPN8Q08723 YIL156W-BYIL156W-B 222 nt2.26□□□□□ -2.05
RPN8Q08723 YIR036W-AYIR036W-A 402 nt2.26□□□□□ -2.05
RPN8Q08723 GIM5YML094W 492 nt2.26□□□□□ -2.05
RPN8Q08723 RPL16BYNL069C 597 nt2.26□□□□□ -2.05
RPN8Q08723 15S_rRNA15S_rRNA 1649 nt2.26□□□□□ -2.05
RPN8Q08723 CTF13YMR094W 1437 nt2.25□□□□□ -2.05
RPN8Q08723 SEN54YPL083C 1404 nt2.25□□□□□ -2.05
RPN8Q08723 YCT1YLL055W 1596 nt2.25□□□□□ -2.05
RPN8Q08723 YFH1YDL120W 525 nt2.25□□□□□ -2.05
RPN8Q08723 COG2YGR120C 789 nt2.25□□□□□ -2.05
RPN8Q08723 OTU2YHL013C 924 nt2.25□□□□□ -2.05
RPN8Q08723 SDS22YKL193C 1017 nt2.25□□□□□ -2.05
RPN8Q08723 NBP1YLR457C 960 nt2.25□□□□□ -2.05
RPN8Q08723 RRT16YNL105W 429 nt2.25□□□□□ -2.05
RPN8Q08723 YNL235CYNL235C 432 nt2.25□□□□□ -2.05
RPN8Q08723 HSP10YOR020C 321 nt2.25□□□□□ -2.05
RPN8Q08723 RBL2YOR265W 321 nt2.25□□□□□ -2.05
RPN8Q08723 PHO91YNR013C 2685 nt2.25□□□□□ -2.05
RPN8Q08723 MCD1YDL003W 1701 nt2.25□□□□□ -2.05
RPN8Q08723 SSQ1YLR369W 1974 nt2.25□□□□□ -2.05
RPN8Q08723 ALY1YKR021W 2748 nt2.25□□□□□ -2.05
RPN8Q08723 INP53YOR109W 3324 nt2.24□□□□□ -2.05
RPN8Q08723 YEL1YBL060W 2064 nt2.24□□□□□ -2.05
RPN8Q08723 YCR064CYCR064C 411 nt2.24□□□□□ -2.05
RPN8Q08723 PBP4YDL053C 558 nt2.24□□□□□ -2.05
RPN8Q08723 YDL163WYDL163W 303 nt2.24□□□□□ -2.05
RPN8Q08723 TAD1YGL243W 1203 nt2.24□□□□□ -2.05
RPN8Q08723 YAL016C-BYAL016C-B 186 nt2.24□□□□□ -2.05
RPN8Q08723 snR191snR191 274 nt2.24□□□□□ -2.05
RPN8Q08723 SSP1YHR184W 1716 nt2.24□□□□□ -2.05
RPN8Q08723 SHS1YDL225W 1656 nt2.24□□□□□ -2.05
RPN8Q08723 PDS5YMR076C 3834 nt2.24□□□□□ -2.05
RPN8Q08723 REF2YDR195W 1602 nt2.24□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 25.5 ms