Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col10a1Q05306 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col10a1Q05306 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col10a1Q05306 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.58■□□□□ 0.24
Col10a1Q05306 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.58■□□□□ 0.24
Col10a1Q05306 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col10a1Q05306 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col10a1Q05306 Flg-201ENSMUST00000050758 1488 ntBASIC16.58■□□□□ 0.24
Col10a1Q05306 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.58■□□□□ 0.24
Col10a1Q05306 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col10a1Q05306 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col10a1Q05306 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col10a1Q05306 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col10a1Q05306 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.58■□□□□ 0.24
Col10a1Q05306 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col10a1Q05306 Fst-202ENSMUST00000223640 2612 ntBASIC16.58■□□□□ 0.24
Col10a1Q05306 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col10a1Q05306 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col10a1Q05306 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col10a1Q05306 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col10a1Q05306 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col10a1Q05306 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col10a1Q05306 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Col10a1Q05306 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col10a1Q05306 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col10a1Q05306 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col10a1Q05306 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col10a1Q05306 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col10a1Q05306 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col10a1Q05306 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col10a1Q05306 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col10a1Q05306 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col10a1Q05306 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Col10a1Q05306 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col10a1Q05306 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col10a1Q05306 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.56■□□□□ 0.24
Col10a1Q05306 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col10a1Q05306 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col10a1Q05306 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col10a1Q05306 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col10a1Q05306 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Col10a1Q05306 Gm12527-201ENSMUST00000117967 564 ntBASIC16.56■□□□□ 0.24
Col10a1Q05306 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.56■□□□□ 0.24
Col10a1Q05306 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col10a1Q05306 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col10a1Q05306 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col10a1Q05306 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.56■□□□□ 0.24
Col10a1Q05306 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Col10a1Q05306 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col10a1Q05306 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.56■□□□□ 0.24
Col10a1Q05306 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col10a1Q05306 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col10a1Q05306 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col10a1Q05306 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col10a1Q05306 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col10a1Q05306 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col10a1Q05306 Dio3-201ENSMUST00000097228 1449 ntBASIC16.55■□□□□ 0.24
Col10a1Q05306 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col10a1Q05306 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col10a1Q05306 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col10a1Q05306 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col10a1Q05306 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Col10a1Q05306 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.55■□□□□ 0.24
Col10a1Q05306 Gm27275-201ENSMUST00000184318 272 ntBASIC16.55■□□□□ 0.24
Col10a1Q05306 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col10a1Q05306 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col10a1Q05306 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col10a1Q05306 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col10a1Q05306 Tgds-204ENSMUST00000228543 1594 ntBASIC16.55■□□□□ 0.24
Col10a1Q05306 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col10a1Q05306 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col10a1Q05306 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Col10a1Q05306 Rarb-207ENSMUST00000225921 2756 ntBASIC16.55■□□□□ 0.24
Col10a1Q05306 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col10a1Q05306 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col10a1Q05306 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Col10a1Q05306 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Col10a1Q05306 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col10a1Q05306 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col10a1Q05306 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col10a1Q05306 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Col10a1Q05306 Gm11927-201ENSMUST00000118472 759 ntBASIC16.54■□□□□ 0.24
Col10a1Q05306 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col10a1Q05306 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col10a1Q05306 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.54■□□□□ 0.24
Col10a1Q05306 Zfp783-201ENSMUST00000095946 670 ntBASIC16.54■□□□□ 0.24
Col10a1Q05306 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col10a1Q05306 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Col10a1Q05306 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col10a1Q05306 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col10a1Q05306 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col10a1Q05306 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Col10a1Q05306 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.54■□□□□ 0.24
Col10a1Q05306 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Col10a1Q05306 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col10a1Q05306 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col10a1Q05306 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.53■□□□□ 0.24
Col10a1Q05306 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col10a1Q05306 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Col10a1Q05306 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 101.7 ms