Protein–RNA interactions for Protein: P53829

CAF40, Protein CAF40, yeastyeast

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF40P53829 PBI2YNL015W 228 nt2.55□□□□□ -2
CAF40P53829 RRT16YNL105W 429 nt2.55□□□□□ -2
CAF40P53829 YNL179CYNL179C 438 nt2.55□□□□□ -2
CAF40P53829 YPR145C-AYPR145C-A 237 nt2.55□□□□□ -2
CAF40P53829 YDR210W-BYDR210W-B 5313 nt2.54□□□□□ -2
CAF40P53829 YDR261W-BYDR261W-B 5313 nt2.54□□□□□ -2
CAF40P53829 YFL002W-AYFL002W-A 5313 nt2.54□□□□□ -2
CAF40P53829 YGR161W-BYGR161W-B 5313 nt2.54□□□□□ -2
CAF40P53829 YLR410W-BYLR410W-B 5313 nt2.54□□□□□ -2
CAF40P53829 YCL019WYCL019W 5313 nt2.54□□□□□ -2
CAF40P53829 ICR1ICR1 3199 nt2.54□□□□□ -2
CAF40P53829 RPS14AYCR031C 414 nt2.54□□□□□ -2
CAF40P53829 HNT1YDL125C 477 nt2.54□□□□□ -2
CAF40P53829 YAP3YHL009C 993 nt2.54□□□□□ -2
CAF40P53829 AKR1YDR264C 2295 nt2.53□□□□□ -2
CAF40P53829 FAA2YER015W 2235 nt2.53□□□□□ -2
CAF40P53829 MMS1YPR164W 4224 nt2.53□□□□□ -2
CAF40P53829 ATP22YDR350C 2055 nt2.53□□□□□ -2
CAF40P53829 CYR1YJL005W 6081 nt2.53□□□□□ -2
CAF40P53829 YOR296WYOR296W 3870 nt2.53□□□□□ -2
CAF40P53829 BI4Q0120 1917 nt2.53□□□□□ -2
CAF40P53829 tK(UUU)DtK(UUU)D 73 nt2.53□□□□□ -2
CAF40P53829 tK(UUU)G1tK(UUU)G1 73 nt2.53□□□□□ -2
CAF40P53829 tK(UUU)G2tK(UUU)G2 73 nt2.53□□□□□ -2
CAF40P53829 tK(UUU)KtK(UUU)K 73 nt2.53□□□□□ -2
CAF40P53829 tK(UUU)LtK(UUU)L 73 nt2.53□□□□□ -2
CAF40P53829 tK(UUU)OtK(UUU)O 73 nt2.53□□□□□ -2
CAF40P53829 tK(UUU)PtK(UUU)P 73 nt2.53□□□□□ -2
CAF40P53829 OTU2YHL013C 924 nt2.53□□□□□ -2
CAF40P53829 SGN1YIR001C 753 nt2.53□□□□□ -2
CAF40P53829 CDC123YLR215C 1083 nt2.53□□□□□ -2
CAF40P53829 YLR302CYLR302C 363 nt2.53□□□□□ -2
CAF40P53829 YMR122W-AYMR122W-A 255 nt2.53□□□□□ -2
CAF40P53829 YNR021WYNR021W 1215 nt2.53□□□□□ -2
CAF40P53829 YPR050CYPR050C 414 nt2.53□□□□□ -2
CAF40P53829 YNR063WYNR063W 1824 nt2.53□□□□□ -2
CAF40P53829 VPS30YPL120W 1674 nt2.53□□□□□ -2
CAF40P53829 RGR1YLR071C 3249 nt2.53□□□□□ -2.01
CAF40P53829 CAF120YNL278W 3183 nt2.52□□□□□ -2.01
CAF40P53829 BNA7YDR428C 786 nt2.52□□□□□ -2.01
CAF40P53829 RPS26BYER131W 360 nt2.52□□□□□ -2.01
CAF40P53829 YHR130CYHR130C 336 nt2.52□□□□□ -2.01
CAF40P53829 YIL054WYIL054W 318 nt2.52□□□□□ -2.01
CAF40P53829 YLR171WYLR171W 390 nt2.52□□□□□ -2.01
CAF40P53829 DDR48YMR173W 1293 nt2.52□□□□□ -2.01
CAF40P53829 YNL146C-AYNL146C-A 195 nt2.52□□□□□ -2.01
CAF40P53829 RRG8YPR116W 834 nt2.52□□□□□ -2.01
CAF40P53829 BIT61YJL058C 1632 nt2.52□□□□□ -2.01
CAF40P53829 GDS1YOR355W 1569 nt2.52□□□□□ -2.01
CAF40P53829 SHQ1YIL104C 1524 nt2.52□□□□□ -2.01
CAF40P53829 STE23YLR389C 3084 nt2.51□□□□□ -2.01
CAF40P53829 BI2Q0110 1272 nt2.51□□□□□ -2.01
CAF40P53829 tQ(UUG)BtQ(UUG)B 72 nt2.51□□□□□ -2.01
CAF40P53829 TCD1YHR003C 1290 nt2.51□□□□□ -2.01
CAF40P53829 MRP49YKL167C 414 nt2.51□□□□□ -2.01
CAF40P53829 HRI1YLR301W 735 nt2.51□□□□□ -2.01
CAF40P53829 CTK3YML112W 891 nt2.51□□□□□ -2.01
CAF40P53829 YMR194C-AYMR194C-A 225 nt2.51□□□□□ -2.01
CAF40P53829 HHT2YNL031C 411 nt2.51□□□□□ -2.01
CAF40P53829 YBR085C-AYBR085C-A 258 nt2.51□□□□□ -2.01
CAF40P53829 snR41snR41 95 nt2.51□□□□□ -2.01
CAF40P53829 MSB2YGR014W 3921 nt2.51□□□□□ -2.01
CAF40P53829 TRZ1YKR079C 2517 nt2.5□□□□□ -2.01
CAF40P53829 NTO1YPR031W 2247 nt2.5□□□□□ -2.01
CAF40P53829 SSF2YDR312W 1362 nt2.5□□□□□ -2.01
CAF40P53829 BOI1YBL085W 2943 nt2.5□□□□□ -2.01
CAF40P53829 BTT1YDR252W 450 nt2.5□□□□□ -2.01
CAF40P53829 HYP2YEL034W 474 nt2.5□□□□□ -2.01
CAF40P53829 YHL005CYHL005C 393 nt2.5□□□□□ -2.01
CAF40P53829 YHC1YLR298C 696 nt2.5□□□□□ -2.01
CAF40P53829 LSM2YBL026W 288 nt2.5□□□□□ -2.01
CAF40P53829 YPL034WYPL034W 498 nt2.5□□□□□ -2.01
CAF40P53829 PRM3YPL192C 402 nt2.5□□□□□ -2.01
CAF40P53829 IRC16YPR038W 360 nt2.5□□□□□ -2.01
CAF40P53829 YKR078WYKR078W 1758 nt2.5□□□□□ -2.01
CAF40P53829 SRO77YBL106C 3033 nt2.5□□□□□ -2.01
CAF40P53829 RIF1YBR275C 5751 nt2.5□□□□□ -2.01
CAF40P53829 YKL222CYKL222C 2118 nt2.5□□□□□ -2.01
CAF40P53829 PSY2YNL201C 2577 nt2.5□□□□□ -2.01
CAF40P53829 YIL174WYIL174W 228 nt2.49□□□□□ -2.01
CAF40P53829 YJL222W-AYJL222W-A 228 nt2.49□□□□□ -2.01
CAF40P53829 YNL324WYNL324W 396 nt2.49□□□□□ -2.01
CAF40P53829 OST2YOR103C 393 nt2.49□□□□□ -2.01
CAF40P53829 ALG14YBR070C 714 nt2.49□□□□□ -2.01
CAF40P53829 SEN54YPL083C 1404 nt2.49□□□□□ -2.01
CAF40P53829 ESL2YKR096W 3588 nt2.49□□□□□ -2.01
CAF40P53829 MUD2YKL074C 1584 nt2.49□□□□□ -2.01
CAF40P53829 TFB1YDR311W 1929 nt2.48□□□□□ -2.01
CAF40P53829 YPL216WYPL216W 3309 nt2.48□□□□□ -2.01
CAF40P53829 YER038W-AYER038W-A 381 nt2.48□□□□□ -2.01
CAF40P53829 YER079C-AYER079C-A 339 nt2.48□□□□□ -2.01
CAF40P53829 YER119C-AYER119C-A 372 nt2.48□□□□□ -2.01
CAF40P53829 YJL127C-BYJL127C-B 159 nt2.48□□□□□ -2.01
CAF40P53829 YKL068W-AYKL068W-A 237 nt2.48□□□□□ -2.01
CAF40P53829 AIM29YKR074W 468 nt2.48□□□□□ -2.01
CAF40P53829 RPL6AYML073C 531 nt2.48□□□□□ -2.01
CAF40P53829 AIM36YMR157C 768 nt2.48□□□□□ -2.01
CAF40P53829 YOL150CYOL150C 312 nt2.48□□□□□ -2.01
CAF40P53829 snR191snR191 274 nt2.48□□□□□ -2.01
CAF40P53829 BFR1YOR198C 1413 nt2.48□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 47.3 ms