Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 YIR020C-BYIR020C-B 735 nt2.68□□□□□ -1.98
RPT4P53549 CPR7YJR032W 1182 nt2.68□□□□□ -1.98
RPT4P53549 HSP10YOR020C 321 nt2.68□□□□□ -1.98
RPT4P53549 PIS1YPR113W 663 nt2.68□□□□□ -1.98
RPT4P53549 SAP190YKR028W 3102 nt2.67□□□□□ -1.98
RPT4P53549 YHR086W-AYHR086W-A 162 nt2.67□□□□□ -1.98
RPT4P53549 MRP49YKL167C 414 nt2.67□□□□□ -1.98
RPT4P53549 VPS51YKR020W 495 nt2.67□□□□□ -1.98
RPT4P53549 YLR255CYLR255C 354 nt2.67□□□□□ -1.98
RPT4P53549 TRM2YKR056W 1920 nt2.67□□□□□ -1.98
RPT4P53549 YFL002W-BYFL002W-B 1317 nt2.67□□□□□ -1.98
RPT4P53549 YGR161W-AYGR161W-A 1317 nt2.67□□□□□ -1.98
RPT4P53549 YBL100W-AYBL100W-A 1317 nt2.67□□□□□ -1.98
RPT4P53549 YCL020WYCL020W 1317 nt2.67□□□□□ -1.98
RPT4P53549 SCD5YOR329C 2619 nt2.66□□□□□ -1.98
RPT4P53549 YDL163WYDL163W 303 nt2.66□□□□□ -1.98
RPT4P53549 FIN1YDR130C 876 nt2.66□□□□□ -1.98
RPT4P53549 YEL050W-AYEL050W-A 192 nt2.66□□□□□ -1.98
RPT4P53549 BRP1YGL007W 378 nt2.66□□□□□ -1.98
RPT4P53549 MND1YGL183C 660 nt2.66□□□□□ -1.98
RPT4P53549 COX8YLR395C 237 nt2.66□□□□□ -1.98
RPT4P53549 FPR1YNL135C 345 nt2.66□□□□□ -1.98
RPT4P53549 YBR209WYBR209W 318 nt2.66□□□□□ -1.98
RPT4P53549 15S_rRNA15S_rRNA 1649 nt2.66□□□□□ -1.98
RPT4P53549 DBP7YKR024C 2229 nt2.66□□□□□ -1.98
RPT4P53549 KAR9YPL269W 1935 nt2.66□□□□□ -1.98
RPT4P53549 SCY1YGL083W 2415 nt2.66□□□□□ -1.98
RPT4P53549 BNA4YBL098W 1383 nt2.65□□□□□ -1.98
RPT4P53549 DUG2YBR281C 2637 nt2.65□□□□□ -1.98
RPT4P53549 FUS1YCL027W 1539 nt2.65□□□□□ -1.99
RPT4P53549 DAD1YDR016C 285 nt2.65□□□□□ -1.99
RPT4P53549 YER107W-AYER107W-A 321 nt2.65□□□□□ -1.99
RPT4P53549 ERV1YGR029W 570 nt2.65□□□□□ -1.99
RPT4P53549 BFR1YOR198C 1413 nt2.65□□□□□ -1.99
RPT4P53549 CWC22YGR278W 1734 nt2.65□□□□□ -1.99
RPT4P53549 FLO11YIR019C 4104 nt2.65□□□□□ -1.99
RPT4P53549 REF2YDR195W 1602 nt2.64□□□□□ -1.99
RPT4P53549 SKT5YBL061C 2091 nt2.64□□□□□ -1.99
RPT4P53549 SSE1YPL106C 2082 nt2.64□□□□□ -1.99
RPT4P53549 SNO3YFL060C 669 nt2.64□□□□□ -1.99
RPT4P53549 YGR109W-AYGR109W-A 873 nt2.64□□□□□ -1.99
RPT4P53549 YIL082WYIL082W 873 nt2.64□□□□□ -1.99
RPT4P53549 IRC21YMR073C 606 nt2.64□□□□□ -1.99
RPT4P53549 SNO2YNL334C 669 nt2.64□□□□□ -1.99
RPT4P53549 YOR152CYOR152C 771 nt2.64□□□□□ -1.99
RPT4P53549 SRL4YPL033C 846 nt2.64□□□□□ -1.99
RPT4P53549 ARL3YPL051W 597 nt2.64□□□□□ -1.99
RPT4P53549 SWC4YGR002C 1431 nt2.64□□□□□ -1.99
RPT4P53549 APC2YLR127C 2562 nt2.64□□□□□ -1.99
RPT4P53549 UTP14YML093W 2700 nt2.64□□□□□ -1.99
RPT4P53549 UBX3YDL091C 1368 nt2.63□□□□□ -1.99
RPT4P53549 CLN3YAL040C 1743 nt2.63□□□□□ -1.99
RPT4P53549 CTF13YMR094W 1437 nt2.63□□□□□ -1.99
RPT4P53549 YDR209CYDR209C 414 nt2.63□□□□□ -1.99
RPT4P53549 GCN4YEL009C 846 nt2.63□□□□□ -1.99
RPT4P53549 TDA2YER071C 381 nt2.63□□□□□ -1.99
RPT4P53549 YGR226CYGR226C 210 nt2.63□□□□□ -1.99
RPT4P53549 YIL068W-AYIL068W-A 384 nt2.63□□□□□ -1.99
RPT4P53549 AIM19YIL087C 474 nt2.63□□□□□ -1.99
RPT4P53549 NYV1YLR093C 762 nt2.63□□□□□ -1.99
RPT4P53549 SFM1YOR021C 642 nt2.63□□□□□ -1.99
RPT4P53549 VHR1YIL056W 1923 nt2.63□□□□□ -1.99
RPT4P53549 PFF1YBR074W 2931 nt2.63□□□□□ -1.99
RPT4P53549 KIN82YCR091W 2163 nt2.63□□□□□ -1.99
RPT4P53549 POM152YMR129W 4014 nt2.63□□□□□ -1.99
RPT4P53549 YBL005W-BYBL005W-B 5268 nt2.62□□□□□ -1.99
RPT4P53549 GEA1YJR031C 4227 nt2.62□□□□□ -1.99
RPT4P53549 snR5snR5 204 nt2.62□□□□□ -1.99
RPT4P53549 YMR31YFR049W 372 nt2.62□□□□□ -1.99
RPT4P53549 EMP24YGL200C 612 nt2.62□□□□□ -1.99
RPT4P53549 YNL235CYNL235C 432 nt2.62□□□□□ -1.99
RPT4P53549 YOL085W-AYOL085W-A 213 nt2.62□□□□□ -1.99
RPT4P53549 YPR170CYPR170C 336 nt2.62□□□□□ -1.99
RPT4P53549 YCL007CYCL007C 393 nt2.62□□□□□ -1.99
RPT4P53549 YLR108CYLR108C 1458 nt2.62□□□□□ -1.99
RPT4P53549 FIR1YER032W 2631 nt2.62□□□□□ -1.99
RPT4P53549 SSN2YDR443C 4263 nt2.62□□□□□ -1.99
RPT4P53549 YDR042CYDR042C 603 nt2.61□□□□□ -1.99
RPT4P53549 YFL012W-AYFL012W-A 375 nt2.61□□□□□ -1.99
RPT4P53549 RPL27AYHR010W 411 nt2.61□□□□□ -1.99
RPT4P53549 PDP3YLR455W 915 nt2.61□□□□□ -1.99
RPT4P53549 AIM32YML050W 936 nt2.61□□□□□ -1.99
RPT4P53549 COG3YER157W 2406 nt2.61□□□□□ -1.99
RPT4P53549 MES1YGR264C 2256 nt2.61□□□□□ -1.99
RPT4P53549 MFB1YDR219C 1398 nt2.61□□□□□ -1.99
RPT4P53549 YKL075CYKL075C 1353 nt2.61□□□□□ -1.99
RPT4P53549 SIP3YNL257C 3690 nt2.61□□□□□ -1.99
RPT4P53549 NCS2YNL119W 1482 nt2.6□□□□□ -1.99
RPT4P53549 YBT1YLL048C 4986 nt2.6□□□□□ -1.99
RPT4P53549 TRZ1YKR079C 2517 nt2.6□□□□□ -1.99
RPT4P53549 FAR7YFR008W 666 nt2.6□□□□□ -1.99
RPT4P53549 YJL086CYJL086C 369 nt2.6□□□□□ -1.99
RPT4P53549 ECM9YKR004C 1134 nt2.6□□□□□ -1.99
RPT4P53549 YLR154W-EYLR154W-E 204 nt2.6□□□□□ -1.99
RPT4P53549 RPS22BYLR367W 393 nt2.6□□□□□ -1.99
RPT4P53549 YMR173W-AYMR173W-A 1185 nt2.6□□□□□ -1.99
RPT4P53549 GIM3YNL153C 390 nt2.6□□□□□ -1.99
RPT4P53549 YAP7YOL028C 738 nt2.6□□□□□ -1.99
RPT4P53549 YRR1YOR162C 2433 nt2.6□□□□□ -1.99
RPT4P53549 GDI1YER136W 1356 nt2.6□□□□□ -1.99
Retrieved 100 of 7,029 protein–RNA pairs in 33.2 ms