Protein–RNA interactions for Protein: P53044

UFD1, Ubiquitin fusion degradation protein 1, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD1P53044 YFL012WYFL012W 447 nt2.09□□□□□ -2.07
UFD1P53044 YGR283CYGR283C 1026 nt2.09□□□□□ -2.07
UFD1P53044 YHR050W-AYHR050W-A 171 nt2.09□□□□□ -2.07
UFD1P53044 EST3YIL009C-A 546 nt2.09□□□□□ -2.07
UFD1P53044 YIR036W-AYIR036W-A 402 nt2.09□□□□□ -2.07
UFD1P53044 YAL037WYAL037W 804 nt2.09□□□□□ -2.07
UFD1P53044 YBR051WYBR051W 351 nt2.09□□□□□ -2.07
UFD1P53044 RPL36BYPL249C-A 303 nt2.09□□□□□ -2.07
UFD1P53044 ADF1YCL058W-A 342 nt2.09□□□□□ -2.07
UFD1P53044 DUG2YBR281C 2637 nt2.09□□□□□ -2.08
UFD1P53044 STE11YLR362W 2154 nt2.09□□□□□ -2.08
UFD1P53044 YIL156W-BYIL156W-B 222 nt2.08□□□□□ -2.08
UFD1P53044 ASG7YJL170C 630 nt2.08□□□□□ -2.08
UFD1P53044 PET191YJR034W 327 nt2.08□□□□□ -2.08
UFD1P53044 RRG8YPR116W 834 nt2.08□□□□□ -2.08
UFD1P53044 YDR186CYDR186C 2634 nt2.08□□□□□ -2.08
UFD1P53044 STH1YIL126W 4080 nt2.08□□□□□ -2.08
UFD1P53044 VPS41YDR080W 2979 nt2.07□□□□□ -2.08
UFD1P53044 TRM2YKR056W 1920 nt2.07□□□□□ -2.08
UFD1P53044 GPM2YDL021W 936 nt2.07□□□□□ -2.08
UFD1P53044 YER107W-AYER107W-A 321 nt2.07□□□□□ -2.08
UFD1P53044 TAD1YGL243W 1203 nt2.07□□□□□ -2.08
UFD1P53044 ERV1YGR029W 570 nt2.07□□□□□ -2.08
UFD1P53044 YGR053CYGR053C 852 nt2.07□□□□□ -2.08
UFD1P53044 RTS3YGR161C 792 nt2.07□□□□□ -2.08
UFD1P53044 OTU2YHL013C 924 nt2.07□□□□□ -2.08
UFD1P53044 YAP5YIR018W 738 nt2.07□□□□□ -2.08
UFD1P53044 YIR020C-BYIR020C-B 735 nt2.07□□□□□ -2.08
UFD1P53044 YRO2YBR054W 1035 nt2.07□□□□□ -2.08
UFD1P53044 snR191snR191 274 nt2.07□□□□□ -2.08
UFD1P53044 SSP1YHR184W 1716 nt2.07□□□□□ -2.08
UFD1P53044 UBX3YDL091C 1368 nt2.07□□□□□ -2.08
UFD1P53044 SEC16YPL085W 6588 nt2.07□□□□□ -2.08
UFD1P53044 SHS1YDL225W 1656 nt2.06□□□□□ -2.08
UFD1P53044 SPB1YCL054W 2526 nt2.06□□□□□ -2.08
UFD1P53044 YCR064CYCR064C 411 nt2.06□□□□□ -2.08
UFD1P53044 YCR099CYCR099C 468 nt2.06□□□□□ -2.08
UFD1P53044 RPL27BYDR471W 411 nt2.06□□□□□ -2.08
UFD1P53044 PRE1YER012W 597 nt2.06□□□□□ -2.08
UFD1P53044 YIP1YGR172C 747 nt2.06□□□□□ -2.08
UFD1P53044 YJL147CYJL147C 1149 nt2.06□□□□□ -2.08
UFD1P53044 YET1YKL065C 621 nt2.06□□□□□ -2.08
UFD1P53044 ARF3YOR094W 552 nt2.06□□□□□ -2.08
UFD1P53044 ALG14YBR070C 714 nt2.06□□□□□ -2.08
UFD1P53044 YCL002CYCL002C 792 nt2.06□□□□□ -2.08
UFD1P53044 SLF1YDR515W 1344 nt2.06□□□□□ -2.08
UFD1P53044 MCD1YDL003W 1701 nt2.05□□□□□ -2.08
UFD1P53044 PHO91YNR013C 2685 nt2.05□□□□□ -2.08
UFD1P53044 RCN1YKL159C 636 nt2.05□□□□□ -2.08
UFD1P53044 SDS22YKL193C 1017 nt2.05□□□□□ -2.08
UFD1P53044 NYV1YLR093C 762 nt2.05□□□□□ -2.08
UFD1P53044 NBP1YLR457C 960 nt2.05□□□□□ -2.08
UFD1P53044 IRC21YMR073C 606 nt2.05□□□□□ -2.08
UFD1P53044 ESC2YDR363W 1371 nt2.05□□□□□ -2.08
UFD1P53044 EDS1YBR033W 2760 nt2.05□□□□□ -2.08
UFD1P53044 BFR1YOR198C 1413 nt2.05□□□□□ -2.08
UFD1P53044 KSP1YHR082C 3090 nt2.05□□□□□ -2.08
UFD1P53044 SCD5YOR329C 2619 nt2.04□□□□□ -2.08
UFD1P53044 RGA1YOR127W 3024 nt2.04□□□□□ -2.08
UFD1P53044 PBP4YDL053C 558 nt2.04□□□□□ -2.08
UFD1P53044 15S_rRNA15S_rRNA 1649 nt2.04□□□□□ -2.08
UFD1P53044 SWA2YDR320C 2007 nt2.04□□□□□ -2.08
UFD1P53044 YEA4YEL004W 1029 nt2.04□□□□□ -2.08
UFD1P53044 ERG28YER044C 447 nt2.04□□□□□ -2.08
UFD1P53044 MRP49YKL167C 414 nt2.04□□□□□ -2.08
UFD1P53044 YCT1YLL055W 1596 nt2.04□□□□□ -2.08
UFD1P53044 CTF13YMR094W 1437 nt2.04□□□□□ -2.08
UFD1P53044 YNR034W-AYNR034W-A 297 nt2.04□□□□□ -2.08
UFD1P53044 ESF2YNR054C 951 nt2.04□□□□□ -2.08
UFD1P53044 YOL134CYOL134C 390 nt2.04□□□□□ -2.08
UFD1P53044 AFI1YOR129C 2682 nt2.04□□□□□ -2.08
UFD1P53044 APC2YLR127C 2562 nt2.04□□□□□ -2.08
UFD1P53044 KAR9YPL269W 1935 nt2.03□□□□□ -2.08
UFD1P53044 MSB1YOR188W 3414 nt2.03□□□□□ -2.08
UFD1P53044 FUS1YCL027W 1539 nt2.03□□□□□ -2.08
UFD1P53044 YIL068W-AYIL068W-A 384 nt2.03□□□□□ -2.08
UFD1P53044 VPS63YLR261C 327 nt2.03□□□□□ -2.08
UFD1P53044 COX8YLR395C 237 nt2.03□□□□□ -2.08
UFD1P53044 COQ10YOL008W 624 nt2.03□□□□□ -2.08
UFD1P53044 SGT1YOR057W 1188 nt2.03□□□□□ -2.08
UFD1P53044 COG3YER157W 2406 nt2.03□□□□□ -2.08
UFD1P53044 SIP3YNL257C 3690 nt2.03□□□□□ -2.09
UFD1P53044 SCY1YGL083W 2415 nt2.02□□□□□ -2.09
UFD1P53044 RPN3YER021W 1572 nt2.02□□□□□ -2.09
UFD1P53044 OSW7YFR039C 1533 nt2.02□□□□□ -2.09
UFD1P53044 SSD1YDR293C 3753 nt2.02□□□□□ -2.09
UFD1P53044 TIM9YEL020W-A 264 nt2.02□□□□□ -2.09
UFD1P53044 RSM18YER050C 417 nt2.02□□□□□ -2.09
UFD1P53044 YAP7YOL028C 738 nt2.02□□□□□ -2.09
UFD1P53044 TRZ1YKR079C 2517 nt2.02□□□□□ -2.09
UFD1P53044 GCV2YMR189W 3105 nt2.02□□□□□ -2.09
UFD1P53044 NEL1YHR035W 1893 nt2.01□□□□□ -2.09
UFD1P53044 MES1YGR264C 2256 nt2.01□□□□□ -2.09
UFD1P53044 snR5snR5 204 nt2.01□□□□□ -2.09
UFD1P53044 TMN3YER113C 2121 nt2.01□□□□□ -2.09
UFD1P53044 YFR009W-AYFR009W-A 258 nt2.01□□□□□ -2.09
UFD1P53044 YOL085W-AYOL085W-A 213 nt2.01□□□□□ -2.09
UFD1P53044 PSK2YOL045W 3306 nt2.01□□□□□ -2.09
UFD1P53044 MFB1YDR219C 1398 nt2□□□□□ -2.09
UFD1P53044 NPR1YNL183C 2373 nt2□□□□□ -2.09
Retrieved 100 of 7,029 protein–RNA pairs in 70.3 ms