Protein–RNA interactions for Protein: P25694

CDC48, Cell division control protein 48, yeastyeast

Known RBP Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC48P25694 SSP1YHR184W 1716 nt3.72□□□□□ -1.81
CDC48P25694 FRE8YLR047C 2061 nt3.72□□□□□ -1.81
CDC48P25694 BMS1YPL217C 3552 nt3.71□□□□□ -1.82
CDC48P25694 SMT3YDR510W 306 nt3.71□□□□□ -1.82
CDC48P25694 YGL165CYGL165C 579 nt3.71□□□□□ -1.82
CDC48P25694 VOA1YGR106C 798 nt3.71□□□□□ -1.82
CDC48P25694 RPS24BYIL069C 408 nt3.71□□□□□ -1.82
CDC48P25694 YLR302CYLR302C 363 nt3.71□□□□□ -1.82
CDC48P25694 YML009C-AYML009C-A 327 nt3.71□□□□□ -1.82
CDC48P25694 YOR121CYOR121C 306 nt3.71□□□□□ -1.82
CDC48P25694 YOR231C-AYOR231C-A 201 nt3.71□□□□□ -1.82
CDC48P25694 GNT1YOR320C 1476 nt3.71□□□□□ -1.82
CDC48P25694 MPS1YDL028C 2295 nt3.7□□□□□ -1.82
CDC48P25694 CCM1YGR150C 2595 nt3.7□□□□□ -1.82
CDC48P25694 YAL031W-AYAL031W-A 309 nt3.7□□□□□ -1.82
CDC48P25694 MRPL31YKL138C 396 nt3.7□□□□□ -1.82
CDC48P25694 YLR230WYLR230W 306 nt3.7□□□□□ -1.82
CDC48P25694 YOR073W-AYOR073W-A 234 nt3.7□□□□□ -1.82
CDC48P25694 TSC3YBR058C-A 243 nt3.7□□□□□ -1.82
CDC48P25694 YPR077CYPR077C 372 nt3.7□□□□□ -1.82
CDC48P25694 LCB4YOR171C 1875 nt3.7□□□□□ -1.82
CDC48P25694 SRB4YER022W 2064 nt3.7□□□□□ -1.82
CDC48P25694 YPR022CYPR022C 3402 nt3.69□□□□□ -1.82
CDC48P25694 SDC1YDR469W 528 nt3.69□□□□□ -1.82
CDC48P25694 RPS26BYER131W 360 nt3.69□□□□□ -1.82
CDC48P25694 YAL063C-AYAL063C-A 291 nt3.69□□□□□ -1.82
CDC48P25694 RPL15AYLR029C 615 nt3.69□□□□□ -1.82
CDC48P25694 YMR122W-AYMR122W-A 255 nt3.69□□□□□ -1.82
CDC48P25694 PEX17YNL214W 600 nt3.69□□□□□ -1.82
CDC48P25694 ZEO1YOL109W 342 nt3.69□□□□□ -1.82
CDC48P25694 YPR016W-AYPR016W-A 261 nt3.69□□□□□ -1.82
CDC48P25694 ARG2YJL071W 1725 nt3.69□□□□□ -1.82
CDC48P25694 PDS5YMR076C 3834 nt3.69□□□□□ -1.82
CDC48P25694 CWH41YGL027C 2502 nt3.69□□□□□ -1.82
CDC48P25694 SEA4YBL104C 3117 nt3.68□□□□□ -1.82
CDC48P25694 YCR022CYCR022C 345 nt3.68□□□□□ -1.82
CDC48P25694 YDR366CYDR366C 399 nt3.68□□□□□ -1.82
CDC48P25694 tK(UUU)DtK(UUU)D 73 nt3.68□□□□□ -1.82
CDC48P25694 tK(UUU)G1tK(UUU)G1 73 nt3.68□□□□□ -1.82
CDC48P25694 tK(UUU)G2tK(UUU)G2 73 nt3.68□□□□□ -1.82
CDC48P25694 tK(UUU)KtK(UUU)K 73 nt3.68□□□□□ -1.82
CDC48P25694 tK(UUU)LtK(UUU)L 73 nt3.68□□□□□ -1.82
CDC48P25694 tK(UUU)OtK(UUU)O 73 nt3.68□□□□□ -1.82
CDC48P25694 tK(UUU)PtK(UUU)P 73 nt3.68□□□□□ -1.82
CDC48P25694 MAM33YIL070C 801 nt3.68□□□□□ -1.82
CDC48P25694 YKL118WYKL118W 312 nt3.68□□□□□ -1.82
CDC48P25694 MRP8YKL142W 660 nt3.68□□□□□ -1.82
CDC48P25694 UBC7YMR022W 498 nt3.68□□□□□ -1.82
CDC48P25694 HHT2YNL031C 411 nt3.68□□□□□ -1.82
CDC48P25694 YPL038W-AYPL038W-A 192 nt3.68□□□□□ -1.82
CDC48P25694 RED1YLR263W 2484 nt3.68□□□□□ -1.82
CDC48P25694 AYT1YLL063C 1425 nt3.68□□□□□ -1.82
CDC48P25694 ETP1YHL010C 1758 nt3.67□□□□□ -1.82
CDC48P25694 YCR081C-AYCR081C-A 237 nt3.67□□□□□ -1.82
CDC48P25694 RTT105YER104W 627 nt3.67□□□□□ -1.82
CDC48P25694 RNR4YGR180C 1038 nt3.67□□□□□ -1.82
CDC48P25694 YHR052W-AYHR052W-A 195 nt3.67□□□□□ -1.82
CDC48P25694 YHR054W-AYHR054W-A 195 nt3.67□□□□□ -1.82
CDC48P25694 tV(CAC)DtV(CAC)D 73 nt3.67□□□□□ -1.82
CDC48P25694 tV(CAC)HtV(CAC)H 73 nt3.67□□□□□ -1.82
CDC48P25694 HSP10YOR020C 321 nt3.67□□□□□ -1.82
CDC48P25694 HHF1YBR009C 312 nt3.67□□□□□ -1.82
CDC48P25694 YOR192C-CYOR192C-C 237 nt3.67□□□□□ -1.82
CDC48P25694 ROY1YMR258C 1662 nt3.67□□□□□ -1.82
CDC48P25694 SKN7YHR206W 1869 nt3.67□□□□□ -1.82
CDC48P25694 MAK5YBR142W 2322 nt3.66□□□□□ -1.82
CDC48P25694 AIM11YER093C-A 414 nt3.66□□□□□ -1.82
CDC48P25694 LAG1YHL003C 1236 nt3.66□□□□□ -1.82
CDC48P25694 ANB1YJR047C 474 nt3.66□□□□□ -1.82
CDC48P25694 YKL083WYKL083W 615 nt3.66□□□□□ -1.82
CDC48P25694 YKL222CYKL222C 2118 nt3.66□□□□□ -1.82
CDC48P25694 YMR158W-BYMR158W-B 321 nt3.66□□□□□ -1.82
CDC48P25694 YMR294W-AYMR294W-A 360 nt3.66□□□□□ -1.82
CDC48P25694 RPS8AYBL072C 603 nt3.66□□□□□ -1.82
CDC48P25694 MRPL50YNR022C 420 nt3.66□□□□□ -1.82
CDC48P25694 TRS120YDR407C 3870 nt3.66□□□□□ -1.82
CDC48P25694 KAP95YLR347C 2586 nt3.65□□□□□ -1.82
CDC48P25694 EMP70YLR083C 2004 nt3.65□□□□□ -1.82
CDC48P25694 XRN1YGL173C 4587 nt3.65□□□□□ -1.82
CDC48P25694 SPA2YLL021W 4401 nt3.65□□□□□ -1.83
CDC48P25694 YMR031W-AYMR031W-A 327 nt3.65□□□□□ -1.83
CDC48P25694 YAF9YNL107W 681 nt3.65□□□□□ -1.83
CDC48P25694 PFY1YOR122C 381 nt3.65□□□□□ -1.83
CDC48P25694 ATP25YMR098C 1839 nt3.65□□□□□ -1.83
CDC48P25694 RPL1BYGL135W 654 nt3.64□□□□□ -1.83
CDC48P25694 FYV4YHR059W 393 nt3.64□□□□□ -1.83
CDC48P25694 ICY1YMR195W 384 nt3.64□□□□□ -1.83
CDC48P25694 YPL080CYPL080C 327 nt3.64□□□□□ -1.83
CDC48P25694 RPL1AYPL220W 654 nt3.64□□□□□ -1.83
CDC48P25694 SMC3YJL074C 3693 nt3.64□□□□□ -1.83
CDC48P25694 MUS81YDR386W 1899 nt3.64□□□□□ -1.83
CDC48P25694 YER039C-AYER039C-A 219 nt3.63□□□□□ -1.83
CDC48P25694 YHL037CYHL037C 402 nt3.63□□□□□ -1.83
CDC48P25694 YJL169WYJL169W 369 nt3.63□□□□□ -1.83
CDC48P25694 YLR416CYLR416C 399 nt3.63□□□□□ -1.83
CDC48P25694 UNG1YML021C 1080 nt3.63□□□□□ -1.83
CDC48P25694 LSM2YBL026W 288 nt3.63□□□□□ -1.83
CDC48P25694 TVP18YMR071C 504 nt3.63□□□□□ -1.83
CDC48P25694 SIP18YMR175W 240 nt3.63□□□□□ -1.83
CDC48P25694 YMR316C-AYMR316C-A 312 nt3.63□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 47.6 ms